RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 CST8O60676 142 aa18.52■□□□□ 0.55
NPAS3-202ENST00000356141 NDUFV1P49821 464 aa18.52■□□□□ 0.55
NPAS3-202ENST00000356141 SP3Q02447 781 aa18.52■□□□□ 0.55
NPAS3-202ENST00000356141 DHX34Q14147 1143 aaKnown RBP18.52■□□□□ 0.55
NPAS3-202ENST00000356141 SLC29A2Q14542 456 aa18.52■□□□□ 0.55
NPAS3-202ENST00000356141 FOXR1Q6PIV2 292 aa18.52■□□□□ 0.55
NPAS3-202ENST00000356141 RFX6Q8HWS3 928 aa18.52■□□□□ 0.55
NPAS3-202ENST00000356141 CNTN3Q9P232 1028 aa18.52■□□□□ 0.55
NPAS3-202ENST00000356141 HESX1Q9UBX0 185 aa18.52■□□□□ 0.55
NPAS3-202ENST00000356141 PSTPIP1O43586 416 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 GNAT1P11488 350 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 LILRA4P59901 499 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 GAD2Q05329 585 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 C1orf228Q6PIY5 440 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 ALKAL1Q6UXT8 129 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 ZNF365Q70YC5 407 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 ADGRF2Q8IZF7 708 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 APPL2Q8NEU8 664 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 FAM76AQ8TAV0 307 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 FAM107BQ9H098 131 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 FAM105AQ9NUU6 356 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.51■□□□□ 0.55
NPAS3-202ENST00000356141 SIGLEC16A6NMB1 481 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 SGK1O00141 431 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 SEPT4O43236 478 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 HSPA9P38646 679 aaKnown RBP18.51■□□□□ 0.55
NPAS3-202ENST00000356141 ZNF844Q08AG5 666 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 CALCOCO2Q13137 446 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 KATNAL2Q8IYT4 538 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 ADAM32Q8TC27 787 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 MED10Q9BTT4 135 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 CYP3A43Q9HB55 503 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 PCYOX1Q9UHG3 505 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 PADI3Q9ULW8 664 aa18.51■□□□□ 0.55
NPAS3-202ENST00000356141 CYB561D2O14569 222 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 PAPSS1O43252 624 aaPredicted RBP18.5■□□□□ 0.55
NPAS3-202ENST00000356141 HUS1O60921 280 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 TM4SF4P48230 202 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 GDF10P55107 478 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 PITX1P78337 314 aaPredicted RBP18.5■□□□□ 0.55
NPAS3-202ENST00000356141 GUCY1A3Q02108 690 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 KLF1Q13351 362 aaPredicted RBP18.5■□□□□ 0.55
NPAS3-202ENST00000356141 CA9Q16790 459 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 PECAM1P16284 738 aaPredicted RBP18.5■□□□□ 0.55
NPAS3-202ENST00000356141 PMS2P54278 862 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 CDH6P55285 790 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 GJA9P57773 515 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 SLC25A11Q02978 314 aaKnown RBP18.5■□□□□ 0.55
NPAS3-202ENST00000356141 P3H1Q32P28 736 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 MDH1BQ5I0G3 518 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 EXD1Q8NHP7 514 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 C9orf72Q96LT7 481 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 STRIP2Q9ULQ0 834 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 USP18Q9UMW8 372 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 CDH5P33151 784 aaPredicted RBP18.5■□□□□ 0.55
NPAS3-202ENST00000356141 BRCC3P46736 316 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 TAF6P49848 677 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 BCAR1P56945 870 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 INCA1Q0VD86 236 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 KIAA0319Q5VV43 1072 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 EPS8L3Q8TE67 593 aaKnown RBP18.5■□□□□ 0.55
NPAS3-202ENST00000356141 ZNF518BQ9C0D4 1074 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 LHX5Q9H2C1 402 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 NOVA2Q9UNW9 492 aaKnown RBP18.5■□□□□ 0.55
NPAS3-202ENST00000356141 HEY1Q9Y5J3 304 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 TRPV2Q9Y5S1 764 aa18.5■□□□□ 0.55
NPAS3-202ENST00000356141 FAM187AA6NFU0 413 aa18.49■□□□□ 0.55
NPAS3-202ENST00000356141 ANKRD65E5RJM6 399 aa18.49■□□□□ 0.55
NPAS3-202ENST00000356141 ADAMTS4O75173 837 aa18.49■□□□□ 0.55
NPAS3-202ENST00000356141 RNF8O76064 485 aa18.49■□□□□ 0.55
NPAS3-202ENST00000356141 HMGCRP04035 888 aa18.49■□□□□ 0.55
NPAS3-202ENST00000356141 ATF2P15336 505 aa18.49■□□□□ 0.55
NPAS3-202ENST00000356141 PIGHQ14442 188 aaPredicted RBP18.49■□□□□ 0.55
NPAS3-202ENST00000356141 LCLAT1Q6UWP7 414 aa18.49■□□□□ 0.55
NPAS3-202ENST00000356141 GSTCDQ8NEC7 633 aa18.49■□□□□ 0.55
NPAS3-202ENST00000356141 RAET1EQ8TD07 263 aa18.49■□□□□ 0.55
NPAS3-202ENST00000356141 KCNK16Q96T55 309 aa18.49■□□□□ 0.55
NPAS3-202ENST00000356141 LRRC19Q9H756 370 aa18.49■□□□□ 0.55
NPAS3-202ENST00000356141 ARL5CA6NH57 179 aa18.49■□□□□ 0.55
NPAS3-202ENST00000356141 MAP3K7CLP57077 242 aa18.49■□□□□ 0.55
NPAS3-202ENST00000356141 OTUD4Q01804 1114 aaKnown RBP18.49■□□□□ 0.55
NPAS3-202ENST00000356141 ACTL9Q8TC94 416 aa18.49■□□□□ 0.55
NPAS3-202ENST00000356141 FAM172AQ8WUF8 416 aa18.49■□□□□ 0.55
NPAS3-202ENST00000356141 LRRC45Q96CN5 670 aa18.49■□□□□ 0.55
NPAS3-202ENST00000356141 ADAM2Q99965 735 aa18.49■□□□□ 0.55
NPAS3-202ENST00000356141 PLEKHA5Q9HAU0 1116 aa18.49■□□□□ 0.55
NPAS3-202ENST00000356141 hCG_1818297A0A087WSY0 165 aa18.48■□□□□ 0.55
NPAS3-202ENST00000356141 PIRO00625 290 aa18.48■□□□□ 0.55
NPAS3-202ENST00000356141 OPA1O60313 960 aa18.48■□□□□ 0.55
NPAS3-202ENST00000356141 CDKN2BP42772 138 aa18.48■□□□□ 0.55
NPAS3-202ENST00000356141 ARSEP51690 589 aa18.48■□□□□ 0.55
NPAS3-202ENST00000356141 GPS1Q13098 491 aa18.48■□□□□ 0.55
NPAS3-202ENST00000356141 BYSLQ13895 437 aaKnown RBP18.48■□□□□ 0.55
NPAS3-202ENST00000356141 KYNUQ16719 465 aa18.48■□□□□ 0.55
NPAS3-202ENST00000356141 DEFB115Q30KQ5 88 aa18.48■□□□□ 0.55
NPAS3-202ENST00000356141 EGFL6Q8IUX8 553 aa18.48■□□□□ 0.55
NPAS3-202ENST00000356141 TSPYL2Q9H2G4 693 aaPredicted RBP18.48■□□□□ 0.55
NPAS3-202ENST00000356141 TBK1Q9UHD2 729 aa18.48■□□□□ 0.55
NPAS3-202ENST00000356141 RANBP2P49792 3224 aaKnown RBP18.48■□□□□ 0.55
NPAS3-202ENST00000356141 TP73O15350 636 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms