RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 CLCNKBP51801 687 aa18.1■□□□□ 0.49
VPS13B-201ENST00000355155 DSC1Q08554 894 aa18.1■□□□□ 0.49
VPS13B-201ENST00000355155 PTK6Q13882 451 aa18.1■□□□□ 0.49
VPS13B-201ENST00000355155 SLC24A5Q71RS6 500 aa18.1■□□□□ 0.49
VPS13B-201ENST00000355155 ANKS1BQ7Z6G8 1248 aa18.1■□□□□ 0.49
VPS13B-201ENST00000355155 GRK7Q8WTQ7 553 aa18.1■□□□□ 0.49
VPS13B-201ENST00000355155 MED4Q9NPJ6 270 aa18.1■□□□□ 0.49
VPS13B-201ENST00000355155 NOD1Q9Y239 953 aa18.1■□□□□ 0.49
VPS13B-201ENST00000355155 DRG1Q9Y295 367 aaKnown RBP18.1■□□□□ 0.49
VPS13B-201ENST00000355155 ARHGEF37A1IGU5 675 aa18.09■□□□□ 0.49
VPS13B-201ENST00000355155 KBTBD13C9JR72 458 aa18.09■□□□□ 0.49
VPS13B-201ENST00000355155 TRUB2O95900 331 aaKnown RBP18.09■□□□□ 0.49
VPS13B-201ENST00000355155 TYMPP19971 482 aa18.09■□□□□ 0.49
VPS13B-201ENST00000355155 SCNN1GP51170 649 aa18.09■□□□□ 0.49
VPS13B-201ENST00000355155 LPPQ93052 612 aa18.09■□□□□ 0.49
VPS13B-201ENST00000355155 TRPV6Q9H1D0 765 aa18.09■□□□□ 0.49
VPS13B-201ENST00000355155 SYNCQ9H7C4 482 aa18.09■□□□□ 0.49
VPS13B-201ENST00000355155 RNF19AQ9NV58 838 aa18.09■□□□□ 0.49
VPS13B-201ENST00000355155 PTPN22Q9Y2R2 807 aa18.09■□□□□ 0.49
VPS13B-201ENST00000355155 RALAP11233 206 aa18.09■□□□□ 0.49
VPS13B-201ENST00000355155 TCF4P15884 667 aa18.09■□□□□ 0.49
VPS13B-201ENST00000355155 SELPP16109 830 aa18.09■□□□□ 0.49
VPS13B-201ENST00000355155 TFDP3Q5H9I0 405 aa18.09■□□□□ 0.49
VPS13B-201ENST00000355155 FAM102AQ5T9C2 384 aaPredicted RBP18.09■□□□□ 0.49
VPS13B-201ENST00000355155 FUKQ8N0W3 1084 aa18.09■□□□□ 0.49
VPS13B-201ENST00000355155 C3orf58Q8NDZ4 430 aa18.09■□□□□ 0.49
VPS13B-201ENST00000355155 SH3GL2Q99962 352 aa18.09■□□□□ 0.49
VPS13B-201ENST00000355155 GRHL1Q9NZI5 618 aa18.09■□□□□ 0.49
VPS13B-201ENST00000355155 NFU1Q9UMS0 254 aa18.09■□□□□ 0.49
VPS13B-201ENST00000355155 AFF1P51825 1210 aaKnown RBP18.08■□□□□ 0.49
VPS13B-201ENST00000355155 FAM193AP78312 1265 aa18.08■□□□□ 0.49
VPS13B-201ENST00000355155 WSCD1Q658N2 575 aa18.08■□□□□ 0.49
VPS13B-201ENST00000355155 FAM171BQ6P995 826 aa18.08■□□□□ 0.49
VPS13B-201ENST00000355155 DCLRE1AQ6PJP8 1040 aa18.08■□□□□ 0.49
VPS13B-201ENST00000355155 TBCBQ99426 244 aa18.08■□□□□ 0.49
VPS13B-201ENST00000355155 GOLGA8SH3BPF8 625 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 TJP3O95049 919 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 IL1R2P27930 398 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 TKTP29401 623 aaKnown RBP18.08■□□□□ 0.48
VPS13B-201ENST00000355155 SMC1AQ14683 1233 aaKnown RBP18.08■□□□□ 0.48
VPS13B-201ENST00000355155 RAB41Q5JT25 222 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 C1orf53Q5VUE5 145 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 KIAA0319Q5VV43 1072 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 GSPT2Q8IYD1 628 aaKnown RBP18.08■□□□□ 0.48
VPS13B-201ENST00000355155 CSNK1G1Q9HCP0 422 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 WHRNQ9P202 907 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 TULP2O00295 520 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 BFSP2Q13515 415 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 GPNMBQ14956 572 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 CCDC14Q49A88 953 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 ZDHHC24Q6UX98 284 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 MFSD7Q6UXD7 560 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 IQCKQ8N0W5 287 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 ATL2Q8NHH9 583 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 RXFP2Q8WXD0 754 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 APBB2Q92870 758 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 NKD2Q969F2 451 aaPredicted RBP18.08■□□□□ 0.48
VPS13B-201ENST00000355155 SUSD3Q96L08 255 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 ACBD6Q9BR61 282 aa18.08■□□□□ 0.48
VPS13B-201ENST00000355155 PARNO95453 639 aaKnown RBP18.07■□□□□ 0.48
VPS13B-201ENST00000355155 KRT1P04264 644 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 ODC1P11926 461 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 CCDC130P13994 396 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 MRPS25P82663 173 aaKnown RBP18.07■□□□□ 0.48
VPS13B-201ENST00000355155 GPS2Q13227 327 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 OR6B2Q6IFH4 312 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 SND1Q7KZF4 910 aaKnown RBP eCLIP18.07■□□□□ 0.48
VPS13B-201ENST00000355155 LRRC8DQ7L1W4 858 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 CRIPAKQ8N1N5 446 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 NT5C3BQ969T7 300 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 RTP3Q9BQQ7 232 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 DDX23Q9BUQ8 820 aaKnown RBP18.07■□□□□ 0.48
VPS13B-201ENST00000355155 CRTAC1Q9NQ79 661 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 FAM49BQ9NUQ9 324 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 USTQ9Y2C2 406 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 NPR3P17342 541 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 KDELR1P24390 212 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 LMNB2Q03252 620 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 PLEKHG4Q58EX7 1191 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 DAB2IPQ5VWQ8 1189 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 TXNRD3NBQ6F5E7 133 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 BBS12Q6ZW61 710 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 SLC2A14Q8TDB8 520 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 ART4Q93070 314 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 NEUROG2Q9H2A3 272 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 KANSL3Q9P2N6 904 aa18.07■□□□□ 0.48
VPS13B-201ENST00000355155 AGPSO00116 658 aa18.06■□□□□ 0.48
VPS13B-201ENST00000355155 MDM4O15151 490 aa18.06■□□□□ 0.48
VPS13B-201ENST00000355155 HCRTO43612 131 aa18.06■□□□□ 0.48
VPS13B-201ENST00000355155 PPFIA2O75334 1257 aa18.06■□□□□ 0.48
VPS13B-201ENST00000355155 RNF8O76064 485 aa18.06■□□□□ 0.48
VPS13B-201ENST00000355155 ECEL1O95672 775 aa18.06■□□□□ 0.48
VPS13B-201ENST00000355155 FAM153BP0C7A2 387 aa18.06■□□□□ 0.48
VPS13B-201ENST00000355155 MIPP30301 263 aa18.06■□□□□ 0.48
VPS13B-201ENST00000355155 TRADDQ15628 312 aa18.06■□□□□ 0.48
VPS13B-201ENST00000355155 FAM153CQ494X1 144 aa18.06■□□□□ 0.48
VPS13B-201ENST00000355155 TIGD5Q53EQ6 642 aa18.06■□□□□ 0.48
VPS13B-201ENST00000355155 LRIG3Q6UXM1 1119 aa18.06■□□□□ 0.48
VPS13B-201ENST00000355155 RAPGEF5Q92565 580 aa18.06■□□□□ 0.48
VPS13B-201ENST00000355155 FAF2Q96CS3 445 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms