RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 ACCSLQ4AC99 568 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 XKR3Q5GH77 459 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 TTC27Q6P3X3 843 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 BNC2Q6ZN30 1099 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 NIM1KQ8IY84 436 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 GCNAQ96QF7 691 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 JPH1Q9HDC5 661 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 ATP11BQ9Y2G3 1177 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 GPR75-ASB3A0A0A6YYF3 556 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 CBFA2T3O75081 653 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 VCAM1P19320 739 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 HYIQ5T013 277 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 RSPH3Q86UC2 560 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 ATXN7L3BQ96GX2 97 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 HOXC10Q9NYD6 342 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 LZTS1Q9Y250 596 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 XPO1O14980 1071 aaKnown RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 MSH4O15457 936 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 ENTPD5O75356 428 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 RPS6KA4O75676 772 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 NTSR2O95665 410 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 FGRP09769 529 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 TGM2P21980 687 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 TRPC1P48995 793 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 MMP14P50281 582 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 VCPP55072 806 aaKnown RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 SLC35C1Q96A29 364 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 GSC2O15499 205 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 GPD1P21695 349 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 CDK7P50613 346 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 C1QBPQ07021 282 aaKnown RBP4.96□□□□□ -1.61
CSMD3-203ENST00000343508 SPDYAQ5MJ70 313 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 GALNT15Q8N3T1 639 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 TMC2Q8TDI7 906 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 SLC5A5Q92911 643 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 TSPAN17Q96FV3 270 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 MAGED4Q96JG8 741 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 PNMA5Q96PV4 448 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 DCLK3Q9C098 648 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 ATXN10Q9UBB4 475 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 LNPEPQ9UIQ6 1025 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 C5P01031 1676 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 RGPD5Q99666 1765 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 ZNF263O14978 683 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 TGDSO95455 350 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 CBX6O95503 412 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 TPBGLP0DKB5 382 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 RALBP11234 206 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 FCGR1AP12314 374 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 OTUD4Q01804 1114 aaKnown RBP4.96□□□□□ -1.61
CSMD3-203ENST00000343508 ITGA9Q13797 1035 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 NCAPG2Q86XI2 1143 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 SP8Q8IXZ3 490 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 NLGN1Q8N2Q7 840 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 GDPD5Q8WTR4 605 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 NCLNQ969V3 563 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 DGCR14Q96DF8 476 aaKnown RBP4.96□□□□□ -1.61
CSMD3-203ENST00000343508 DACH2Q96NX9 599 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 RRN3Q9NYV6 651 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 EDF1O60869 148 aaKnown RBP4.96□□□□□ -1.61
CSMD3-203ENST00000343508 HUS1O60921 280 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 OCM2P0CE71 109 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 OCMP0CE72 109 aaPredicted RBP4.96□□□□□ -1.61
CSMD3-203ENST00000343508 AKR1B1P15121 316 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 NPR1P16066 1061 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 CDH2P19022 906 aaPredicted RBP4.96□□□□□ -1.61
CSMD3-203ENST00000343508 RRM1P23921 792 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 PPIDQ08752 370 aaKnown RBP4.96□□□□□ -1.61
CSMD3-203ENST00000343508 KRT72Q14CN4 511 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 ARCQ7LC44 396 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.96□□□□□ -1.61
CSMD3-203ENST00000343508 KCNMB3Q9NPA1 279 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 KCNH7Q9NS40 1196 aa4.96□□□□□ -1.61
CSMD3-203ENST00000343508 CYP3A7-CYP3A51PA0A087WV96 503 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 DYTNA2CJ06 578 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 MAP3K13O43283 966 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 OATP04181 439 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 ITGAVP06756 1048 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 GARTP22102 1010 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 CYP3A7P24462 503 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 SOX6P35712 828 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 RPL5P46777 297 aaKnown RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 NR2C2P49116 596 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 HK2P52789 917 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 HADHBP55084 474 aaKnown RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 TAF12Q16514 161 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 SLC5A9Q2M3M2 681 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 TCHHL1Q5QJ38 904 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 PLEKHA7Q6IQ23 1121 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 HHIPL2Q6UWX4 724 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 TSHZ1Q6ZSZ6 1077 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 DHDDSQ86SQ9 333 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 CCNYL1Q8N7R7 359 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 C4orf32Q8N8J7 132 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 TOPORSQ9NS56 1045 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 WDR46O15213 610 aaKnown RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 DAB1O75553 588 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 ADRA2BP18089 450 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 OTOP1Q7RTM1 612 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 DDIASQ8IXT1 998 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms