RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 SENP8Q96LD8 212 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 ZIM3Q96PE6 472 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 FAM118BQ9BPY3 351 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 RSAD1Q9HA92 442 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 PCSK1NQ9UHG2 260 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 hCG_1818297A0A087WSY0 165 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 A0A0U1RQF3 1178 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 A0A1W2PQ45 241 aaPredicted RBP21.01■□□□□ 0.95
RTN1-202ENST00000342503 A0A1W2PQY0 241 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 C3orf70A6NLC5 250 aaPredicted RBP21.01■□□□□ 0.95
RTN1-202ENST00000342503 PAPSS1O43252 624 aaPredicted RBP21.01■□□□□ 0.95
RTN1-202ENST00000342503 ATP2C2O75185 946 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 RNF8O76064 485 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 PDGFRAP16234 1089 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 ACAT1P24752 427 aaKnown RBP21.01■□□□□ 0.95
RTN1-202ENST00000342503 MIPP30301 263 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 CDKN2BP42772 138 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 SNX16P57768 344 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 KRT17Q04695 432 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 TAF5Q15542 800 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 SMTNL2Q2TAL5 461 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 KCNT1Q5JUK3 1230 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 CFAP58Q5T655 872 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 ZDHHC24Q6UX98 284 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 SCUBE3Q8IX30 993 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 ZNF296Q8WUU4 475 aaPredicted RBP21.01■□□□□ 0.95
RTN1-202ENST00000342503 LRRC45Q96CN5 670 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 CNPY3Q9BT09 278 aa21.01■□□□□ 0.95
RTN1-202ENST00000342503 CASTOR2A6NHX0 329 aa21■□□□□ 0.95
RTN1-202ENST00000342503 GABRDO14764 452 aa21■□□□□ 0.95
RTN1-202ENST00000342503 CAND2O75155 1236 aa21■□□□□ 0.95
RTN1-202ENST00000342503 TJP3O95049 919 aa21■□□□□ 0.95
RTN1-202ENST00000342503 TRUB2O95900 331 aaKnown RBP21■□□□□ 0.95
RTN1-202ENST00000342503 CKBP12277 381 aa21■□□□□ 0.95
RTN1-202ENST00000342503 TKTP29401 623 aaKnown RBP21■□□□□ 0.95
RTN1-202ENST00000342503 TFDP3Q5H9I0 405 aa21■□□□□ 0.95
RTN1-202ENST00000342503 IQCKQ8N0W5 287 aa21■□□□□ 0.95
RTN1-202ENST00000342503 C3orf58Q8NDZ4 430 aa21■□□□□ 0.95
RTN1-202ENST00000342503 ATL2Q8NHH9 583 aa21■□□□□ 0.95
RTN1-202ENST00000342503 GRK7Q8WTQ7 553 aa21■□□□□ 0.95
RTN1-202ENST00000342503 KHSRPQ92945 711 aaKnown RBP eCLIP21■□□□□ 0.95
RTN1-202ENST00000342503 PGBD4Q96DM1 585 aa21■□□□□ 0.95
RTN1-202ENST00000342503 FMO2Q99518 471 aa21■□□□□ 0.95
RTN1-202ENST00000342503 FAN1Q9Y2M0 1017 aa21■□□□□ 0.95
RTN1-202ENST00000342503 GTF3C5Q9Y5Q8 519 aaPredicted RBP21■□□□□ 0.95
RTN1-202ENST00000342503 SQORQ9Y6N5 450 aa21■□□□□ 0.95
RTN1-202ENST00000342503 DPYSL4O14531 572 aa20.99■□□□□ 0.95
RTN1-202ENST00000342503 PTPN1P18031 435 aaKnown RBP20.99■□□□□ 0.95
RTN1-202ENST00000342503 GRK4P32298 578 aa20.99■□□□□ 0.95
RTN1-202ENST00000342503 GBP1P32455 592 aa20.99■□□□□ 0.95
RTN1-202ENST00000342503 RPL9P32969 192 aaKnown RBP20.99■□□□□ 0.95
RTN1-202ENST00000342503 RPL34P49207 117 aaKnown RBP20.99■□□□□ 0.95
RTN1-202ENST00000342503 PLTPP55058 493 aa20.99■□□□□ 0.95
RTN1-202ENST00000342503 C15orf59Q2T9L4 293 aaPredicted RBP20.99■□□□□ 0.95
RTN1-202ENST00000342503 SH3PXD2AQ5TCZ1 1133 aa20.99■□□□□ 0.95
RTN1-202ENST00000342503 TRAF7Q6Q0C0 670 aa20.99■□□□□ 0.95
RTN1-202ENST00000342503 DSTYKQ6XUX3 929 aa20.99■□□□□ 0.95
RTN1-202ENST00000342503 SYDE1Q6ZW31 735 aaPredicted RBP20.99■□□□□ 0.95
RTN1-202ENST00000342503 SLC43A3Q8NBI5 491 aa20.99■□□□□ 0.95
RTN1-202ENST00000342503 CCDC114Q96M63 670 aa20.99■□□□□ 0.95
RTN1-202ENST00000342503 PAAF1Q9BRP4 392 aa20.99■□□□□ 0.95
RTN1-202ENST00000342503 B3GNT5Q9BYG0 378 aa20.99■□□□□ 0.95
RTN1-202ENST00000342503 USP18Q9UMW8 372 aa20.99■□□□□ 0.95
RTN1-202ENST00000342503 POMCP01189 267 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 KDELR1P24390 212 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 PCK1P35558 622 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 HSD17B3P37058 310 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 HTRA3P83110 453 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 GABPB1Q06547 395 aaPredicted RBP20.98■□□□□ 0.95
RTN1-202ENST00000342503 PTK6Q13882 451 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 UPP1Q16831 310 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 CCDC142Q17RM4 750 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 CCDC14Q49A88 953 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 RAB6CQ53S08 254 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 TMC3Q7Z5M5 1100 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 ZDHHC17Q8IUH5 632 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 PEBP4Q96S96 227 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 RUFY1Q96T51 708 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 HNRNPABQ99729 332 aaKnown RBP20.98■□□□□ 0.95
RTN1-202ENST00000342503 RAB6CQ9H0N0 254 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 STARD7Q9NQZ5 370 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 DDX43Q9NXZ2 648 aaKnown RBP20.98■□□□□ 0.95
RTN1-202ENST00000342503 VPS18Q9P253 973 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 SKIP12755 728 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 LCP1P13796 627 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 ARHGEF6Q15052 776 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 UAP1Q16222 522 aaPredicted RBP20.98■□□□□ 0.95
RTN1-202ENST00000342503 KIAA0319Q5VV43 1072 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 ECHDC2Q86YB7 292 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 FUKQ8N0W3 1084 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 TMEM86AQ8N2M4 240 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 FBXO25Q8TCJ0 367 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 CLEC4CQ8WTT0 213 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 CFAP57Q96MR6 1250 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 SH3GL2Q99962 352 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 CYLDQ9NQC7 956 aa20.98■□□□□ 0.95
RTN1-202ENST00000342503 FEZ2Q9UHY8 353 aaPredicted RBP20.98■□□□□ 0.95
RTN1-202ENST00000342503 TSC2P49815 1807 aa20.97■□□□□ 0.95
RTN1-202ENST00000342503 CLDN5O00501 218 aa20.97■□□□□ 0.95
RTN1-202ENST00000342503 LIASO43766 372 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms