RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 UCMAQ8WVF2 138 aa15.05■□□□□ 0
CPSF7-201ENST00000340437 CLPTM1LQ96KA5 538 aa15.05■□□□□ 0
CPSF7-201ENST00000340437 TTC1Q99614 292 aa15.05■□□□□ 0
CPSF7-201ENST00000340437 ASCC2Q9H1I8 757 aaPredicted RBP15.05■□□□□ 0
CPSF7-201ENST00000340437 NGRNQ9NPE2 291 aaKnown RBP15.05■□□□□ 0
CPSF7-201ENST00000340437 RNF19AQ9NV58 838 aa15.05■□□□□ 0
CPSF7-201ENST00000340437 ZFATQ9P243 1243 aa15.05■□□□□ 0
CPSF7-201ENST00000340437 SLC24A2Q9UI40 661 aa15.05■□□□□ 0
CPSF7-201ENST00000340437 NR2E3Q9Y5X4 410 aa15.05■□□□□ 0
CPSF7-201ENST00000340437 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.05■□□□□ 0
CPSF7-201ENST00000340437 A0A0B4J269 797 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 H0YCG3 227 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 TOP3BO95985 862 aaKnown RBP15.05■□□□□ -0
CPSF7-201ENST00000340437 APRTP07741 180 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 KDELR1P24390 212 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 TUBP50607 506 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 TGFB2P61812 414 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 TMEM132BQ14DG7 1078 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 ARID3BQ8IVW6 561 aaPredicted RBP15.05■□□□□ -0
CPSF7-201ENST00000340437 CFAP61Q8NHU2 1237 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 HEXIM2Q96MH2 286 aaKnown RBP15.05■□□□□ -0
CPSF7-201ENST00000340437 CPXM1Q96SM3 734 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 NIF3L1Q9GZT8 377 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.05■□□□□ -0
CPSF7-201ENST00000340437 MAGED2Q9UNF1 606 aaPredicted RBP15.05■□□□□ -0
CPSF7-201ENST00000340437 SPDYE5A6NIY4 337 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 B2RBV5 119 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 KCNN4O15554 427 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 UGT1A9O60656 530 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 MIPP30301 263 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 ZNF200P98182 395 aaPredicted RBP15.05■□□□□ -0
CPSF7-201ENST00000340437 KRT81Q14533 505 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 KLHL38Q2WGJ6 581 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 MROH9Q5TGP6 573 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 NSL1Q96IY1 281 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 FOXP3Q9BZS1 431 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 PORCNQ9H237 461 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 UGT1A7Q9HAW7 530 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 UGT1A10Q9HAW8 530 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 UGT1A8Q9HAW9 530 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 DDX56Q9NY93 547 aaKnown RBP15.05■□□□□ -0
CPSF7-201ENST00000340437 CYTH4Q9UIA0 394 aa15.05■□□□□ -0
CPSF7-201ENST00000340437 ANKRD31Q8N7Z5 1873 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 M0QYV0 167 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 NVLO15381 856 aaKnown RBP15.04■□□□□ -0
CPSF7-201ENST00000340437 SKIV2L2P42285 1042 aaKnown RBP15.04■□□□□ -0
CPSF7-201ENST00000340437 CCDC15Q0P6D6 951 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 SNX30Q5VWJ9 437 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 CASC4Q6P4E1 433 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 WDR60Q8WVS4 1066 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 WDR83Q9BRX9 315 aaKnown RBP15.04■□□□□ -0
CPSF7-201ENST00000340437 TCRBV9S1A1TA0A576 114 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 B4GALT5O43286 388 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 CCDC22O60826 627 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 ITGAVP06756 1048 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 POLR2BP30876 1174 aaKnown RBP15.04■□□□□ -0
CPSF7-201ENST00000340437 PGM1P36871 562 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 DPYSL3Q14195 570 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 EFHC2Q5JST6 749 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 TMEM192Q8IY95 271 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 ARFGAP1Q8N6T3 406 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 GMLQ99445 158 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 DDX50Q9BQ39 737 aaKnown RBP15.04■□□□□ -0
CPSF7-201ENST00000340437 ADPGKQ9BRR6 497 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 KANSL3Q9P2N6 904 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 HMGXB4Q9UGU5 601 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 DRG1Q9Y295 367 aaKnown RBP15.04■□□□□ -0
CPSF7-201ENST00000340437 CNTNAP2Q9UHC6 1331 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 IQANK1A0A1B0GTG1 560 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 EME2A4GXA9 379 aaPredicted RBP15.04■□□□□ -0
CPSF7-201ENST00000340437 SMNDC1O75940 238 aaKnown RBP eCLIP15.04■□□□□ -0
CPSF7-201ENST00000340437 LUC7L3O95232 432 aaKnown RBP15.04■□□□□ -0
CPSF7-201ENST00000340437 RFC5P40937 340 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 MCL1Q07820 350 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 PARP6Q2NL67 630 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 SLC45A4Q5BKX6 768 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 ANO7Q6IWH7 933 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 DEFB129Q9H1M3 183 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 PCMTD2Q9NV79 361 aa15.04■□□□□ -0
CPSF7-201ENST00000340437 MYH9P35579 1960 aaKnown RBP15.03■□□□□ -0
CPSF7-201ENST00000340437 C2CD2LO14523 706 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 FCHO1O14526 889 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 ASS1P00966 412 aaKnown RBP15.03■□□□□ -0
CPSF7-201ENST00000340437 TNNC2P02585 160 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 NAMPTP43490 491 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 ROR1Q01973 937 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 FLAD1Q8NFF5 587 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 PPP1R13LQ8WUF5 828 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 NMUR2Q9GZQ4 415 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 E5RJQ4 531 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 I3L4J1 428 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 TBC1D12O60347 775 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 TOM1L1O75674 476 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 KRT7P08729 469 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 UBTFL6P0CB48 400 aaPredicted RBP15.03■□□□□ -0
CPSF7-201ENST00000340437 DPEP1P16444 411 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 STAT5BP51692 787 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 GRM1Q13255 1194 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 ACSBG2Q5FVE4 666 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 CDHR3Q6ZTQ4 885 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms