RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 GOLGA6L7A0A1B0GV03 622 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SLC15A5A6NIM6 579 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 BTBD19C9JJ37 291 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 M0QYV0 167 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SNX3O60493 162 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SPAG6O75602 509 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 DNAJC8O75937 253 aaPredicted RBP11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 F2P00734 622 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CYP2C8P10632 490 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 TGM2P21980 687 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 HOXA11P31270 313 aaPredicted RBP11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 NDST1P52848 882 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 OSTNP61366 133 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 IFT88Q13099 833 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 KCTD19Q17RG1 926 aaPredicted RBP11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 MAP1SQ66K74 1059 aaPredicted RBP11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 GLIS1Q8NBF1 620 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 PRMT1Q99873 361 aaKnown RBP11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 TINF2Q9BSI4 451 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 C11orf84Q9BUA3 381 aaPredicted RBP11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SAMD15Q9P1V8 674 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CST8O60676 142 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 GPR32O75388 356 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 BRAFP15056 766 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 YBX3P16989 372 aaKnown RBP eCLIP11.23□□□□□ -0.611e-8■■■□□ 14.9
TRAF3IP2-201ENST00000340026 PHBP35232 272 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ADCYAP1R1P41586 468 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SLCO1A2P46721 670 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ADAM17P78536 824 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ACVR2BQ13705 512 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 KAZNQ674X7 775 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 OLFML1Q6UWY5 402 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 GPR142Q7Z601 462 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SUGP1Q8IWZ8 645 aaKnown RBP11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 LRRC34Q8IZ02 419 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 GBP7Q8N8V2 638 aaPredicted RBP11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 DENND1AQ8TEH3 1009 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SLC35F5Q8WV83 523 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 NLRP7Q8WX94 980 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CPT1BQ92523 772 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 GCOM2Q9BZD3 368 aaPredicted RBP11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 DNAI2Q9GZS0 605 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SYNCQ9H7C4 482 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SLC5A4Q9NY91 659 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 TSPAN16Q9UKR8 245 aa11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.23□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CCT8L1PA6NM43 557 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 VTNP04004 478 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SMPD1P17405 629 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CYP3A5P20815 502 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 PTPN9P43378 593 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ARL4CP56559 192 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 HIF1AQ16665 826 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SLC9A4Q6AI14 798 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SESTD1Q86VW0 696 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 MAP7D3Q8IWC1 876 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CRYBG2Q8N1P7 616 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CENPIQ92674 756 aaPredicted RBP11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CPB2Q96IY4 423 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 PARK7Q99497 189 aaKnown RBP11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ZNF670Q9BS34 389 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SYT17Q9BSW7 474 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 RABEP2Q9H5N1 569 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SAYSD1Q9NPB0 183 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 KLHL11Q9NVR0 708 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 GDAP2Q9NXN4 497 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 TJP2Q9UDY2 1190 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 Q9Y3F1 56 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 FAM47DPA6NHR8 397 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 GOLGA8SH3BPF8 625 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 MCF2LO15068 1137 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ZNF189O75820 626 aaPredicted RBP11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 GJC1P36383 396 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 LLGL1Q15334 1064 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 KLHL38Q2WGJ6 581 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 NOTUMQ6P988 496 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ATP11CQ8NB49 1132 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 BEST2Q8NFU1 509 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 BRI3BPQ8WY22 251 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 HEXIM2Q96MH2 286 aaKnown RBP11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 TMEM121Q9BTD3 319 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 PNPLA8Q9NP80 782 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SLC12A4Q9UP95 1085 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 EXOC1LA0A1B0GW35 172 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SGK1O00141 431 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 HAS3O00219 553 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CHADO15335 359 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 RASSF9O75901 435 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ZNF286BP0CG31 522 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 KCNE1P15382 129 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 DESP17661 470 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 HOXC8P31273 242 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 PNPLA4P41247 253 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CTCFP49711 727 aaPredicted RBP11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 IGBP1P78318 339 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CCDC15Q0P6D6 951 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 XRCC4Q13426 336 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 DPYSL3Q14195 570 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SPDYAQ5MJ70 313 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 FAM102AQ5T9C2 384 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms