RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 VCPIP1Q96JH7 1222 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 MAML3Q96JK9 1138 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 BCO2Q9BYV7 579 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 HAUS2Q9NVX0 235 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 PIN4Q9Y237 131 aaKnown RBP9.29□□□□□ -0.92
SNCA-201ENST00000336904 DICER1Q9UPY3 1922 aaKnown RBP9.28□□□□□ -0.92
SNCA-201ENST00000336904 CLDN5O00501 218 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 TREHO43280 583 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 GABBR2O75899 941 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 CELF2O95319 508 aaKnown RBP9.28□□□□□ -0.92
SNCA-201ENST00000336904 AGTP01019 485 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 PFKMP08237 780 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 RPL22P35268 128 aaKnown RBP9.28□□□□□ -0.92
SNCA-201ENST00000336904 CETN2P41208 172 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 NUMBP49757 651 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 EIF3EP60228 445 aaKnown RBP9.28□□□□□ -0.92
SNCA-201ENST00000336904 MYO1EQ12965 1108 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 PIGHQ14442 188 aaPredicted RBP9.28□□□□□ -0.92
SNCA-201ENST00000336904 CCDC121Q6ZUS5 278 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 IGDCC3Q8IVU1 814 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 ZFP42Q96MM3 310 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 ZNF317Q96PQ6 595 aaPredicted RBP9.28□□□□□ -0.92
SNCA-201ENST00000336904 WDR83Q9BRX9 315 aaKnown RBP9.28□□□□□ -0.92
SNCA-201ENST00000336904 MAGED2Q9UNF1 606 aaPredicted RBP9.28□□□□□ -0.92
SNCA-201ENST00000336904 TIMM13Q9Y5L4 95 aaPredicted RBP9.28□□□□□ -0.92
SNCA-201ENST00000336904 MYO18AQ92614 2054 aaKnown RBP9.28□□□□□ -0.92
SNCA-201ENST00000336904 CITO14578 2027 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 SIGLEC16A6NMB1 481 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 DNALI1O14645 258 aaPredicted RBP9.28□□□□□ -0.92
SNCA-201ENST00000336904 SPTLC1O15269 473 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 RECQL4O94761 1208 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 LSM8O95777 96 aaKnown RBP9.28□□□□□ -0.92
SNCA-201ENST00000336904 CTSHP09668 335 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 RBP3P10745 1247 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 YY1P25490 414 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 GCAP28676 217 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 HOXA11P31270 313 aaPredicted RBP9.28□□□□□ -0.92
SNCA-201ENST00000336904 ABCD1P33897 745 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 PITX1P78337 314 aaPredicted RBP9.28□□□□□ -0.92
SNCA-201ENST00000336904 ACVR2BQ13705 512 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 OASLQ15646 514 aaKnown RBP9.28□□□□□ -0.92
SNCA-201ENST00000336904 PAN2Q504Q3 1202 aaKnown RBP9.28□□□□□ -0.92
SNCA-201ENST00000336904 DARS2Q6PI48 645 aaKnown RBP9.28□□□□□ -0.92
SNCA-201ENST00000336904 KCNV1Q6PIU1 500 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 TRMT10CQ7L0Y3 403 aaKnown RBP9.28□□□□□ -0.92
SNCA-201ENST00000336904 PYROXD2Q8N2H3 581 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 PPTC7Q8NI37 304 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 KATNBL1Q9H079 304 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 SLCO1B3Q9NPD5 702 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 TMEM51Q9NW97 253 aa9.28□□□□□ -0.92
SNCA-201ENST00000336904 TPX2Q9ULW0 747 aaKnown RBP9.28□□□□□ -0.92
SNCA-201ENST00000336904 H7C0C1 242 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 FAM155BO75949 473 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 RNF8O76064 485 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 MYL3P08590 195 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 ATP5OP48047 213 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 USP50Q70EL3 339 aaPredicted RBP9.27□□□□□ -0.93
SNCA-201ENST00000336904 RUNDC3BQ96NL0 473 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 PCDHGC3Q9UN70 934 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 TRIM33Q9UPN9 1127 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 BPTFQ12830 3046 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 PLXNA1Q9UIW2 1896 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 A0A087WUV0 522 aaPredicted RBP9.27□□□□□ -0.93
SNCA-201ENST00000336904 A8MXQ7 604 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 HMGCRP04035 888 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 FGFR1P11362 822 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 CYP2C9P11712 490 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 STX2P32856 288 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 AP3M2P53677 418 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 TNFAIP2Q03169 654 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 SOX4Q06945 474 aaPredicted RBP9.27□□□□□ -0.93
SNCA-201ENST00000336904 DNAJC3Q13217 504 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 KRT81Q14533 505 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 ZNF484Q5JVG2 852 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 LDLRAD1Q5T700 205 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 RNASEH2BQ5TBB1 312 aaKnown RBP9.27□□□□□ -0.93
SNCA-201ENST00000336904 OLFML2BQ68BL8 750 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 FBXO36Q8NEA4 188 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 ADAM32Q8TC27 787 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 FAM172AQ8WUF8 416 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 MAIP1Q8WWC4 291 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 CPT1BQ92523 772 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 SLCO2A1Q92959 643 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 TINF2Q9BSI4 451 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 GRID1Q9ULK0 1009 aa9.27□□□□□ -0.93
SNCA-201ENST00000336904 MED7O43513 233 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 IL18RAPO95256 599 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 TRUB2O95900 331 aaKnown RBP9.26□□□□□ -0.93
SNCA-201ENST00000336904 SMIM10L2AP0DMW4 78 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 SMIM10L2BP0DMW5 78 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 MCF2P10911 925 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 FOXN2P32314 431 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 GPX6P59796 221 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 EMC10Q5UCC4 262 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 KIF2BQ8N4N8 673 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 ZCCHC9Q8N567 271 aaKnown RBP9.26□□□□□ -0.93
SNCA-201ENST00000336904 RNF169Q8NCN4 708 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 PPM1EQ8WY54 764 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 PRCCQ92733 491 aaPredicted RBP9.26□□□□□ -0.93
SNCA-201ENST00000336904 CFAP36Q96G28 342 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms