RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 GDF6Q6KF10 455 aaPredicted RBP13.22□□□□□ -0.29
LIMK1-201ENST00000336180 MSL3Q8N5Y2 521 aaKnown RBP13.22□□□□□ -0.29
LIMK1-201ENST00000336180 ATL2Q8NHH9 583 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 SLC2A14Q8TDB8 520 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 PABPC3Q9H361 631 aaKnown RBP13.22□□□□□ -0.29
LIMK1-201ENST00000336180 PCDHGC3Q9UN70 934 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 SLC45A1Q9Y2W3 748 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 hCG_1818297A0A087WSY0 165 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 E7EVH7 732 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 LSM8O95777 96 aaKnown RBP13.21□□□□□ -0.29
LIMK1-201ENST00000336180 GAS8O95995 478 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 HSPA6P17066 643 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 CDKN2BP42772 138 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 FNTAP49354 379 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 NUMBP49757 651 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 FKBP1BP68106 108 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 TAX1BP1Q86VP1 789 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 FAM71DQ8N9W8 422 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 ADAM32Q8TC27 787 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 ART4Q93070 314 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 FAM149B1Q96BN6 582 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 VCPIP1Q96JH7 1222 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 USP18Q9UMW8 372 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 MFHAS1Q9Y4C4 1052 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 CDY2AQ9Y6F7 541 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 ZSWIM8A7E2V4 1837 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 RRN3P2A6NIE6 340 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 SIGLEC16A6NMB1 481 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 RIPK2O43353 540 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 LIASO43766 372 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 P4HA1P13674 534 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 TKTP29401 623 aaKnown RBP13.21□□□□□ -0.29
LIMK1-201ENST00000336180 NDUFV1P49821 464 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 PURAQ00577 322 aaKnown RBP13.21□□□□□ -0.29
LIMK1-201ENST00000336180 SLC25A11Q02978 314 aaKnown RBP13.21□□□□□ -0.29
LIMK1-201ENST00000336180 ENPEPQ07075 957 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 IFRD2Q12894 506 aaPredicted RBP13.21□□□□□ -0.29
LIMK1-201ENST00000336180 UBXN11Q5T124 520 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 FAM228AQ86W67 206 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 STKLD1Q8NE28 680 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 SNF8Q96H20 258 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 MIOSQ9NXC5 875 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 ITGA11Q9UKX5 1188 aa13.21□□□□□ -0.29
LIMK1-201ENST00000336180 SCN4AP35499 1836 aa13.21□□□□□ -0.3
LIMK1-201ENST00000336180 TCRBV7S3A2A0A539 114 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 CCDC189A1A4V9 331 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 HGSO14964 777 aaPredicted RBP13.2□□□□□ -0.3
LIMK1-201ENST00000336180 BEST1O76090 585 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 POMCP01189 267 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 GHRP10912 638 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 CCND3P30281 292 aaPredicted RBP13.2□□□□□ -0.3
LIMK1-201ENST00000336180 RGS2P41220 211 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 ANKRD22Q5VYY1 191 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 ZNF410Q86VK4 478 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 UNC45BQ8IWX7 931 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 ANKRD42Q8N9B4 389 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 SMG8Q8ND04 991 aaKnown RBP13.2□□□□□ -0.3
LIMK1-201ENST00000336180 BEST2Q8NFU1 509 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 TXLNGYQ9BZA5 131 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 SAYSD1Q9NPB0 183 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 CITO14578 2027 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 VDRP11473 427 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 OSTM1Q86WC4 334 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 CCDC13Q8IYE1 715 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 RCOR2Q8IZ40 523 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.2□□□□□ -0.3
LIMK1-201ENST00000336180 KCNN1Q92952 543 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 RASSF4Q9H2L5 321 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 AGO3Q9H9G7 860 aaKnown RBP13.2□□□□□ -0.3
LIMK1-201ENST00000336180 C2CD2Q9Y426 696 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 COL1A2P08123 1366 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 TRIM66O15016 1216 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 RGS16O15492 202 aaPredicted RBP13.2□□□□□ -0.3
LIMK1-201ENST00000336180 PAPSS1O43252 624 aaPredicted RBP13.2□□□□□ -0.3
LIMK1-201ENST00000336180 RNF8O76064 485 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 LSP1P33241 339 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 GNL1P36915 607 aaPredicted RBP13.2□□□□□ -0.3
LIMK1-201ENST00000336180 PIGHQ14442 188 aaPredicted RBP13.2□□□□□ -0.3
LIMK1-201ENST00000336180 CNGA2Q16280 664 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 TFDP3Q5H9I0 405 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 FBXO47Q5MNV8 452 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 WSCD1Q658N2 575 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 IFNLR1Q8IU57 520 aaPredicted RBP13.2□□□□□ -0.3
LIMK1-201ENST00000336180 PYROXD2Q8N2H3 581 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 CEP41Q9BYV8 373 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 ST3GAL5Q9UNP4 418 aa13.2□□□□□ -0.3
LIMK1-201ENST00000336180 KPNA7A9QM74 516 aa13.19□□□□□ -0.3
LIMK1-201ENST00000336180 POC1B-GALNT4F8VUJ3 575 aa13.19□□□□□ -0.3
LIMK1-201ENST00000336180 NDUFAB1O14561 156 aa13.19□□□□□ -0.3
LIMK1-201ENST00000336180 KDELR1P24390 212 aa13.19□□□□□ -0.3
LIMK1-201ENST00000336180 THPOP40225 353 aa13.19□□□□□ -0.3
LIMK1-201ENST00000336180 CPT1AP50416 773 aa13.19□□□□□ -0.3
LIMK1-201ENST00000336180 MTMR3Q13615 1198 aa13.19□□□□□ -0.3
LIMK1-201ENST00000336180 CYP4X1Q8N118 509 aa13.19□□□□□ -0.3
LIMK1-201ENST00000336180 FAM172AQ8WUF8 416 aa13.19□□□□□ -0.3
LIMK1-201ENST00000336180 KBTBD7Q8WVZ9 684 aa13.19□□□□□ -0.3
LIMK1-201ENST00000336180 ZFYVE28Q9HCC9 887 aa13.19□□□□□ -0.3
LIMK1-201ENST00000336180 PIH1D1Q9NWS0 290 aaKnown RBP13.19□□□□□ -0.3
LIMK1-201ENST00000336180 SMIM35A0A1B0GVV1 85 aa13.19□□□□□ -0.3
LIMK1-201ENST00000336180 EIF3HO15372 352 aaKnown RBP eCLIP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms