RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 ZNF473Q8WTR7 871 aaKnown RBP17.23■□□□□ 0.35
PDZD8-201ENST00000334464 WDR41Q9HAD4 459 aa17.23■□□□□ 0.35
PDZD8-201ENST00000334464 RBP1P09455 135 aa17.23■□□□□ 0.35
PDZD8-201ENST00000334464 CYP4Z2PQ8N1L4 340 aa17.23■□□□□ 0.35
PDZD8-201ENST00000334464 RMND5BQ96G75 393 aaPredicted RBP17.23■□□□□ 0.35
PDZD8-201ENST00000334464 LRRC1Q9BTT6 524 aa17.23■□□□□ 0.35
PDZD8-201ENST00000334464 MYO18AQ92614 2054 aaKnown RBP17.23■□□□□ 0.35
PDZD8-201ENST00000334464 RHOBTB1O94844 696 aa17.23■□□□□ 0.35
PDZD8-201ENST00000334464 INPP5DQ92835 1189 aa17.23■□□□□ 0.35
PDZD8-201ENST00000334464 SF3B1O75533 1304 aaKnown RBP eCLIP17.23■□□□□ 0.35
PDZD8-201ENST00000334464 RPA1P27694 616 aa17.23■□□□□ 0.35
PDZD8-201ENST00000334464 CHRNB3Q05901 458 aa17.23■□□□□ 0.35
PDZD8-201ENST00000334464 TMEM143Q96AN5 459 aa17.23■□□□□ 0.35
PDZD8-201ENST00000334464 GTF3C4Q9UKN8 822 aa17.23■□□□□ 0.35
PDZD8-201ENST00000334464 SLC39A10Q9ULF5 831 aa17.23■□□□□ 0.35
PDZD8-201ENST00000334464 HLA-DRAP01903 254 aa17.23■□□□□ 0.35
PDZD8-201ENST00000334464 CASP1P29466 404 aa17.23■□□□□ 0.35
PDZD8-201ENST00000334464 ACOT2P49753 483 aa17.23■□□□□ 0.35
PDZD8-201ENST00000334464 SLC30A5Q8TAD4 765 aa17.23■□□□□ 0.35
PDZD8-201ENST00000334464 GINS4Q9BRT9 223 aa17.23■□□□□ 0.35
PDZD8-201ENST00000334464 HACL1Q9UJ83 578 aa17.23■□□□□ 0.35
PDZD8-201ENST00000334464 INO80Q9ULG1 1556 aaPredicted RBP17.22■□□□□ 0.35
PDZD8-201ENST00000334464 ATP5BP06576 529 aaKnown RBP17.22■□□□□ 0.35
PDZD8-201ENST00000334464 CHD4Q14839 1912 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 EXOSC10Q01780 885 aaKnown RBP17.22■□□□□ 0.35
PDZD8-201ENST00000334464 ARHGAP17Q68EM7 881 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 GPAT2Q6NUI2 795 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 GPRASP2Q96D09 838 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 MARCOQ9UEW3 520 aaPredicted RBP17.22■□□□□ 0.35
PDZD8-201ENST00000334464 F5H5T6 163 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 TEX33O43247 280 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 NMT1P30419 496 aaKnown RBP17.22■□□□□ 0.35
PDZD8-201ENST00000334464 CACNB2Q08289 660 aaPredicted RBP17.22■□□□□ 0.35
PDZD8-201ENST00000334464 COLEC11Q9BWP8 271 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 CLPBQ9H078 707 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 FAM84BQ96KN1 310 aaPredicted RBP17.22■□□□□ 0.35
PDZD8-201ENST00000334464 BBS2Q9BXC9 721 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 CYP2C9P11712 490 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 AKR1B1P15121 316 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 UBE3AQ05086 875 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 ANGPT1Q15389 498 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 USP38Q8NB14 1042 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 TBX20Q9UMR3 447 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 GLRA3O75311 464 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 BCAT1P54687 386 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 TBL3Q12788 808 aaKnown RBP17.22■□□□□ 0.35
PDZD8-201ENST00000334464 LONRF1Q17RB8 773 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 ERAP2Q6P179 960 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 GPR141Q7Z602 305 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 EXOSC4Q9NPD3 245 aaKnown RBP17.22■□□□□ 0.35
PDZD8-201ENST00000334464 EZH2Q15910 746 aaKnown RBP17.22■□□□□ 0.35
PDZD8-201ENST00000334464 COL23A1Q86Y22 540 aaPredicted RBP17.22■□□□□ 0.35
PDZD8-201ENST00000334464 ERGIC2Q96RQ1 377 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 SCUBE2Q9NQ36 999 aa17.22■□□□□ 0.35
PDZD8-201ENST00000334464 RP1L1Q8IWN7 2480 aaPredicted RBP17.22■□□□□ 0.35
PDZD8-201ENST00000334464 WBP4O75554 376 aaKnown RBP17.21■□□□□ 0.35
PDZD8-201ENST00000334464 FAM45BPQ6NSW5 357 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 EFCAB1Q9HAE3 211 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 IGF2BP3O00425 579 aaKnown RBP eCLIP17.21■□□□□ 0.35
PDZD8-201ENST00000334464 RBP3P10745 1247 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 CHRM3P20309 590 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 ARID5BQ14865 1188 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 SRBD1Q8N5C6 995 aaKnown RBP17.21■□□□□ 0.35
PDZD8-201ENST00000334464 ZNF669Q96BR6 464 aaPredicted RBP17.21■□□□□ 0.35
PDZD8-201ENST00000334464 UBQLN1Q9UMX0 589 aaKnown RBP17.21■□□□□ 0.35
PDZD8-201ENST00000334464 RPL10AP62906 217 aaKnown RBP17.21■□□□□ 0.35
PDZD8-201ENST00000334464 TRIM16LQ309B1 348 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 ZCCHC8Q6NZY4 707 aaKnown RBP17.21■□□□□ 0.35
PDZD8-201ENST00000334464 KDELC2Q7Z4H8 507 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 CCDC103Q8IW40 242 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 CELF1Q92879 486 aaKnown RBP17.21■□□□□ 0.35
PDZD8-201ENST00000334464 AHSPQ9NZD4 102 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 H0YC42 278 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 USP39Q53GS9 565 aaKnown RBP17.21■□□□□ 0.35
PDZD8-201ENST00000334464 HERC6Q8IVU3 1022 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 GPR101Q96P66 508 aaPredicted RBP17.21■□□□□ 0.35
PDZD8-201ENST00000334464 MAGEB16A2A368 324 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 ATXN3P54252 364 aaPredicted RBP17.21■□□□□ 0.35
PDZD8-201ENST00000334464 MMRN1Q13201 1228 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 CYP4A22Q5TCH4 519 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 MOXD1Q6UVY6 613 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 NDUFB10O96000 172 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 THRAP10827 490 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 SLC26A2P50443 739 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 RENBPP51606 427 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 TMEM169Q96HH4 297 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 TRPM5Q9NZQ8 1165 aa17.21■□□□□ 0.35
PDZD8-201ENST00000334464 CUL2Q13617 745 aa17.21■□□□□ 0.34
PDZD8-201ENST00000334464 MAGEB18Q96M61 343 aa17.21■□□□□ 0.34
PDZD8-201ENST00000334464 ZCCHC2Q9C0B9 1178 aaKnown RBP17.21■□□□□ 0.34
PDZD8-201ENST00000334464 VPS51Q9UID3 782 aa17.21■□□□□ 0.34
PDZD8-201ENST00000334464 VIRMAQ69YN4 1812 aaKnown RBP17.2■□□□□ 0.34
PDZD8-201ENST00000334464 CHI3L2Q15782 390 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 ITGA8P53708 1063 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 ACTN3Q08043 901 aaPredicted RBP17.2■□□□□ 0.34
PDZD8-201ENST00000334464 O00370 1275 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 NR3C2P08235 984 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 MAD2L1Q13257 205 aaPredicted RBP17.2■□□□□ 0.34
PDZD8-201ENST00000334464 PDIA6Q15084 440 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 DENND1BQ6P3S1 775 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms