RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 ATL2Q8NHH9 583 aa15.7■□□□□ 0.1
TPM3-205ENST00000328159 GLT1D1Q96MS3 346 aa15.7■□□□□ 0.1
TPM3-205ENST00000328159 SH3GL2Q99962 352 aa15.7■□□□□ 0.1
TPM3-205ENST00000328159 C3orf70A6NLC5 250 aaPredicted RBP15.69■□□□□ 0.1
TPM3-205ENST00000328159 PAPSS1O43252 624 aaPredicted RBP15.69■□□□□ 0.1
TPM3-205ENST00000328159 GABBR2O75899 941 aa15.69■□□□□ 0.1
TPM3-205ENST00000328159 TRUB2O95900 331 aaKnown RBP15.69■□□□□ 0.1
TPM3-205ENST00000328159 GAS8O95995 478 aa15.69■□□□□ 0.1
TPM3-205ENST00000328159 PDGFRAP16234 1089 aa15.69■□□□□ 0.1
TPM3-205ENST00000328159 IGFBP6P24592 240 aaPredicted RBP15.69■□□□□ 0.1
TPM3-205ENST00000328159 PCK1P35558 622 aa15.69■□□□□ 0.1
TPM3-205ENST00000328159 HSD17B3P37058 310 aa15.69■□□□□ 0.1
TPM3-205ENST00000328159 ADCY2Q08462 1091 aa15.69■□□□□ 0.1
TPM3-205ENST00000328159 MTMR3Q13615 1198 aa15.69■□□□□ 0.1
TPM3-205ENST00000328159 PTK6Q13882 451 aa15.69■□□□□ 0.1
TPM3-205ENST00000328159 WSCD1Q658N2 575 aa15.69■□□□□ 0.1
TPM3-205ENST00000328159 TMC3Q7Z5M5 1100 aa15.69■□□□□ 0.1
TPM3-205ENST00000328159 ZDHHC17Q8IUH5 632 aa15.69■□□□□ 0.1
TPM3-205ENST00000328159 SLC2A14Q8TDB8 520 aa15.69■□□□□ 0.1
TPM3-205ENST00000328159 SENP8Q96LD8 212 aa15.69■□□□□ 0.1
TPM3-205ENST00000328159 TSEN34Q9BSV6 310 aaKnown RBP15.69■□□□□ 0.1
TPM3-205ENST00000328159 CYLDQ9NQC7 956 aa15.69■□□□□ 0.1
TPM3-205ENST00000328159 CACNG4Q9UBN1 327 aa15.69■□□□□ 0.1
TPM3-205ENST00000328159 FRMPD3Q5JV73 1810 aa15.69■□□□□ 0.1
TPM3-205ENST00000328159 TDRD15B5MCY1 1934 aaKnown RBP15.68■□□□□ 0.1
TPM3-205ENST00000328159 A0A0U1RQF3 1178 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 DPYSL4O14531 572 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 CAND2O75155 1236 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 GRAP2O75791 330 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 RPL34P49207 117 aaKnown RBP15.68■□□□□ 0.1
TPM3-205ENST00000328159 CLCNKBP51801 687 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 DHX9Q08211 1270 aaKnown RBP15.68■□□□□ 0.1
TPM3-205ENST00000328159 TERF2Q15554 542 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 UAP1Q16222 522 aaPredicted RBP15.68■□□□□ 0.1
TPM3-205ENST00000328159 SMTNL2Q2TAL5 461 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 KCNT1Q5JUK3 1230 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 SCUBE3Q8IX30 993 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 GOLGA6L1Q8N7Z2 621 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 RNF169Q8NCN4 708 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 B3GALNT2Q8NCR0 500 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 FBXO25Q8TCJ0 367 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 KHSRPQ92945 711 aaKnown RBP eCLIP15.68■□□□□ 0.1
TPM3-205ENST00000328159 CCDC114Q96M63 670 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 ADAM2Q99965 735 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 FAM118BQ9BPY3 351 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 RSAD1Q9HA92 442 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 PCSK1NQ9UHG2 260 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 USP18Q9UMW8 372 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 SQORQ9Y6N5 450 aa15.68■□□□□ 0.1
TPM3-205ENST00000328159 GABRDO14764 452 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 ATP2C2O75185 946 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 PPFIA2O75334 1257 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 KDELR1P24390 212 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 TKTP29401 623 aaKnown RBP15.67■□□□□ 0.1
TPM3-205ENST00000328159 RPL9P32969 192 aaKnown RBP15.67■□□□□ 0.1
TPM3-205ENST00000328159 GYS2P54840 703 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 TAF5Q15542 800 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 TAZQ16635 292 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 LHX8Q68G74 356 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 SLAIN1Q8ND83 568 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 ART4Q93070 314 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 PGBD4Q96DM1 585 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 HNRNPABQ99729 332 aaKnown RBP15.67■□□□□ 0.1
TPM3-205ENST00000328159 TXLNGYQ9BZA5 131 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 FAM129AQ9BZQ8 928 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 HMX1Q9NP08 348 aaPredicted RBP15.67■□□□□ 0.1
TPM3-205ENST00000328159 WHRNQ9P202 907 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 MTRF1LQ9UGC7 380 aaKnown RBP15.67■□□□□ 0.1
TPM3-205ENST00000328159 ASIC3Q9UHC3 531 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 PLAAQ9Y263 795 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 EFR3BQ9Y2G0 817 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 CASTOR2A6NHX0 329 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 GOLGA8KD6RF30 607 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 LIASO43766 372 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 CAPN15O75808 1086 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 SKIP12755 728 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 PTPN1P18031 435 aaKnown RBP15.67■□□□□ 0.1
TPM3-205ENST00000328159 ACAT1P24752 427 aaKnown RBP15.67■□□□□ 0.1
TPM3-205ENST00000328159 ACADSBP45954 432 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 VEGFBP49765 207 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 C15orf59Q2T9L4 293 aaPredicted RBP15.67■□□□□ 0.1
TPM3-205ENST00000328159 CCDC14Q49A88 953 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 SH3PXD2AQ5TCZ1 1133 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 DRICH1Q6PGQ1 229 aaPredicted RBP15.67■□□□□ 0.1
TPM3-205ENST00000328159 LRIG3Q6UXM1 1119 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 DSTYKQ6XUX3 929 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 TMEM86AQ8N2M4 240 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 CMASQ8NFW8 434 aaPredicted RBP15.67■□□□□ 0.1
TPM3-205ENST00000328159 UBLCP1Q8WVY7 318 aaPredicted RBP15.67■□□□□ 0.1
TPM3-205ENST00000328159 HSFY1Q96LI6 401 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 B3GNT5Q9BYG0 378 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 TRPV6Q9H1D0 765 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 NEU2Q9Y3R4 380 aa15.67■□□□□ 0.1
TPM3-205ENST00000328159 XPO1O14980 1071 aaKnown RBP15.66■□□□□ 0.1
TPM3-205ENST00000328159 FKTNO75072 461 aa15.66■□□□□ 0.1
TPM3-205ENST00000328159 CKBP12277 381 aa15.66■□□□□ 0.1
TPM3-205ENST00000328159 IBSPP21815 317 aaPredicted RBP15.66■□□□□ 0.1
TPM3-205ENST00000328159 SCNN1AP37088 669 aa15.66■□□□□ 0.1
TPM3-205ENST00000328159 LMNB2Q03252 620 aa15.66■□□□□ 0.1
TPM3-205ENST00000328159 CALCOCO2Q13137 446 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms