RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 MSANTD1Q6ZTZ1 278 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 PLEKHA8Q96JA3 519 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 MKNK1Q9BUB5 465 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 SNX9Q9Y5X1 595 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 MBD5Q9P267 1494 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 ASB14A6NK59 587 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 HIST1H2AGP0C0S8 130 aaPredicted RBP10.06□□□□□ -0.8
COL12A1-201ENST00000322507 HIST1H2ADP20671 130 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 HADHAP40939 763 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 ILF3Q12906 894 aaKnown RBP eCLIP10.06□□□□□ -0.8
COL12A1-201ENST00000322507 BTN2A2Q8WVV5 523 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 AKAP1Q92667 903 aaKnown RBP eCLIP10.06□□□□□ -0.8
COL12A1-201ENST00000322507 HIST1H2AHQ96KK5 128 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 HIST1H2AJQ99878 128 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 H2AFJQ9BTM1 129 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 RUBCNLQ9H714 662 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 SEC24DO94855 1032 aaPredicted RBP10.06□□□□□ -0.8
COL12A1-201ENST00000322507 ATP6V1B1P15313 513 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 FEN1P39748 380 aaKnown RBP10.06□□□□□ -0.8
COL12A1-201ENST00000322507 TWF2Q6IBS0 349 aaKnown RBP10.06□□□□□ -0.8
COL12A1-201ENST00000322507 KLHL35Q6PF15 583 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 EDC3Q96F86 508 aaKnown RBP10.06□□□□□ -0.8
COL12A1-201ENST00000322507 ASIC4Q96FT7 647 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 SLC39A3Q9BRY0 314 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 BCS1LQ9Y276 419 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 NTRK1P04629 796 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 HMBOX1Q6NT76 420 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 RASGRP2Q7LDG7 609 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 RIN3Q8TB24 985 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 PCNAP12004 261 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 TOP3AQ13472 1001 aaPredicted RBP10.06□□□□□ -0.8
COL12A1-201ENST00000322507 ZFP69Q49AA0 526 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 ZNF618Q5T7W0 954 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 CCDC60Q8IWA6 550 aaPredicted RBP10.06□□□□□ -0.8
COL12A1-201ENST00000322507 FMR1NBQ8N0W7 255 aaPredicted RBP10.06□□□□□ -0.8
COL12A1-201ENST00000322507 DCUN1D1Q96GG9 259 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 PCDHA6Q9UN73 950 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 PCDHA8Q9Y5H6 950 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 TRPC5OSA6NMA1 111 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 RASA1P20936 1047 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 ZNF235Q14590 738 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 TRIP10Q15642 601 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 AKIRIN2Q53H80 203 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 CYFIP1Q7L576 1253 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 CCDC185Q8N715 623 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 L3MBTL3Q96JM7 780 aaPredicted RBP10.05□□□□□ -0.8
COL12A1-201ENST00000322507 TMEM168Q9H0V1 697 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 RANBP17Q9H2T7 1088 aaKnown RBP10.05□□□□□ -0.8
COL12A1-201ENST00000322507 C5orf58C9J3I9 102 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 TRIM66O15016 1216 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 RTN3O95197 1032 aaPredicted RBP10.05□□□□□ -0.8
COL12A1-201ENST00000322507 CCDC130P13994 396 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 RXRGP48443 463 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 PDK1Q15118 436 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 TTLL6Q8N841 843 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 SCAIQ8N9R8 606 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 RBAKQ9NYW8 714 aaPredicted RBP10.05□□□□□ -0.8
COL12A1-201ENST00000322507 HEY1Q9Y5J3 304 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 CD4P01730 458 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 MKLN1Q9UL63 735 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 TRIM23P36406 574 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 KPNA1P52294 538 aaPredicted RBP10.05□□□□□ -0.8
COL12A1-201ENST00000322507 GTF2H3Q13889 308 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 SMCO1Q147U7 214 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 C11orf74Q86VG3 221 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 PCDHA10Q9Y5I2 948 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 PDE4DIPQ5VU43 2346 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 CASC3O15234 703 aaKnown RBP10.05□□□□□ -0.8
COL12A1-201ENST00000322507 DRAP1Q14919 205 aaPredicted RBP10.05□□□□□ -0.8
COL12A1-201ENST00000322507 USPL1Q5W0Q7 1092 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 ACMSDQ8TDX5 336 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 POP5Q969H6 163 aaKnown RBP10.05□□□□□ -0.8
COL12A1-201ENST00000322507 OSBP2Q969R2 916 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 PCIF1Q9H4Z3 704 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 ZBTB1Q9Y2K1 713 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 MAGI3Q5TCQ9 1506 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 AKAP10O43572 662 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 ZMYND10O75800 440 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 SLC2A3P11169 496 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 CBX3Q13185 183 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 ZBED8Q8IZ13 594 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 NMD3Q96D46 503 aaKnown RBP10.05□□□□□ -0.8
COL12A1-201ENST00000322507 RNPC3Q96LT9 517 aaKnown RBP10.05□□□□□ -0.8
COL12A1-201ENST00000322507 LY9Q9HBG7 655 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 RIC8BQ9NVN3 520 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 KCNIP3Q9Y2W7 256 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 ZMYM2Q9UBW7 1377 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 SSNA1O43805 119 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 ECM2O94769 699 aaPredicted RBP10.05□□□□□ -0.8
COL12A1-201ENST00000322507 PTK6Q13882 451 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 CYB5D1Q6P9G0 228 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 PJA1Q8NG27 643 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 MOSPD2Q8NHP6 518 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 EGFL8Q99944 293 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 AIFM2Q9BRQ8 373 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 SPATA16Q9BXB7 569 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 PUS7LQ9H0K6 701 aaKnown RBP10.05□□□□□ -0.8
COL12A1-201ENST00000322507 IMPAD1Q9NX62 359 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 SNX12Q9UMY4 172 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 TUFMP49411 452 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms