RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 TTC30AQ86WT1 665 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 LRRC52Q8N7C0 313 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 BBOF1Q8ND07 529 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 ACTL9Q8TC94 416 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 RXFP2Q8WXD0 754 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 PGM2Q96G03 612 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 RAB6CQ9H0N0 254 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 C10orf88Q9H8K7 445 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 ASNSD1Q9NWL6 643 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 WBP1LQ9NX94 342 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 SLC12A6Q9UHW9 1150 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 UBQLN1Q9UMX0 589 aaKnown RBP7.95□□□□□ -1.14
IFT88-201ENST00000319980 DOCK3Q8IZD9 2030 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 TTC4O95801 387 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 LMO2P25791 158 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 AXLP30530 894 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 PTPN7P35236 360 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 ZNF143P52747 638 aaPredicted RBP7.94□□□□□ -1.14
IFT88-201ENST00000319980 VCPP55072 806 aaKnown RBP7.94□□□□□ -1.14
IFT88-201ENST00000319980 PURAQ00577 322 aaKnown RBP7.94□□□□□ -1.14
IFT88-201ENST00000319980 OTUD4Q01804 1114 aaKnown RBP7.94□□□□□ -1.14
IFT88-201ENST00000319980 STILQ15468 1287 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 TWF2Q6IBS0 349 aaKnown RBP7.94□□□□□ -1.14
IFT88-201ENST00000319980 TRNP1Q6NT89 227 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 DRICH1Q6PGQ1 229 aaPredicted RBP7.94□□□□□ -1.14
IFT88-201ENST00000319980 REM2Q8IYK8 340 aaPredicted RBP7.94□□□□□ -1.14
IFT88-201ENST00000319980 ALLCQ8N6M5 410 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 MDM1Q8TC05 714 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 TLCD1Q96CP7 247 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 APBA2Q99767 749 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 KATNAL1Q9BW62 490 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 B3GNT5Q9BYG0 378 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 MIS12Q9H081 205 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 FAM107BQ9H098 131 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 DPEP3Q9H4B8 488 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 FAM124BQ9H5Z6 455 aaPredicted RBP7.94□□□□□ -1.14
IFT88-201ENST00000319980 HESX1Q9UBX0 185 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 MYADML2A6NDP7 307 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 C2CD4BA6NLJ0 364 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 KPNA7A9QM74 516 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 SPTLC1O15269 473 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 TRUB2O95900 331 aaKnown RBP7.94□□□□□ -1.14
IFT88-201ENST00000319980 GPD1P21695 349 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 MAP2K2P36507 400 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 CDR1P51861 262 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 ACAP1Q15027 740 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 OASLQ15646 514 aaKnown RBP7.94□□□□□ -1.14
IFT88-201ENST00000319980 GNASQ5JWF2 1037 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 ZNF618Q5T7W0 954 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 SCYL2Q6P3W7 929 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 C9orf72Q96LT7 481 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 CFAP57Q96MR6 1250 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 RBM15Q96T37 977 aaKnown RBP eCLIP7.94□□□□□ -1.14
IFT88-201ENST00000319980 CNPY3Q9BT09 278 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 EPN3Q9H201 632 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 ADAM7Q9H2U9 754 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 ZFYVE28Q9HCC9 887 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 DRG1Q9Y295 367 aaKnown RBP7.94□□□□□ -1.14
IFT88-201ENST00000319980 IPPQ9Y573 584 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 MGAMO43451 1857 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 ANK1P16157 1881 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 KAT6AQ92794 2004 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 E7EVH7 732 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 CD4P01730 458 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 ITGAVP06756 1048 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 GNAT1P11488 350 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 CRYBB1P53674 252 aaPredicted RBP7.94□□□□□ -1.14
IFT88-201ENST00000319980 SOX4Q06945 474 aaPredicted RBP7.94□□□□□ -1.14
IFT88-201ENST00000319980 CRHR2Q13324 411 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 PTGISQ16647 500 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 CCDC38Q502W7 563 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 PKDCCQ504Y2 493 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 UBXN11Q5T124 520 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 HIBCHQ6NVY1 386 aaPredicted RBP7.94□□□□□ -1.14
IFT88-201ENST00000319980 RFX6Q8HWS3 928 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 CMASQ8NFW8 434 aaPredicted RBP7.94□□□□□ -1.14
IFT88-201ENST00000319980 SLC35B2Q8TB61 432 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 CCHCR1Q8TD31 782 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 SLC35F5Q8WV83 523 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 SOCS4Q8WXH5 440 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 NKD2Q969F2 451 aaPredicted RBP7.94□□□□□ -1.14
IFT88-201ENST00000319980 PKNOX2Q96KN3 472 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 PEBP4Q96S96 227 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 NGRNQ9NPE2 291 aaKnown RBP7.94□□□□□ -1.14
IFT88-201ENST00000319980 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.94□□□□□ -1.14
IFT88-201ENST00000319980 EFR3BQ9Y2G0 817 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 Q9Y3F1 56 aa7.94□□□□□ -1.14
IFT88-201ENST00000319980 PIRO00625 290 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 PRPSAP2O60256 369 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 CCDC130P13994 396 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 AKR1A1P14550 325 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 ADORA2BP29275 332 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 CTGFP29279 349 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 PCK1P35558 622 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 GNL1P36915 607 aaPredicted RBP7.93□□□□□ -1.14
IFT88-201ENST00000319980 GDF10P55107 478 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 CDH6P55285 790 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 MMRN1Q13201 1228 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 AUHQ13825 339 aaKnown RBP7.93□□□□□ -1.14
IFT88-201ENST00000319980 HP1BP3Q5SSJ5 553 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms