RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 TCRBV5S1A1TA0A578 114 aa13.73□□□□□ -0.21
CPNE1-201ENST00000317677 MYBL1P10243 752 aa13.73□□□□□ -0.21
CPNE1-201ENST00000317677 ELNP15502 786 aa13.73□□□□□ -0.21
CPNE1-201ENST00000317677 ALDH3A1P30838 453 aa13.73□□□□□ -0.21
CPNE1-201ENST00000317677 ATICP31939 592 aa13.73□□□□□ -0.21
CPNE1-201ENST00000317677 CRYBB1P53674 252 aaPredicted RBP13.73□□□□□ -0.21
CPNE1-201ENST00000317677 LRRC23Q53EV4 343 aaPredicted RBP13.73□□□□□ -0.21
CPNE1-201ENST00000317677 DAB2IPQ5VWQ8 1189 aa13.73□□□□□ -0.21
CPNE1-201ENST00000317677 PLEKHA7Q6IQ23 1121 aa13.73□□□□□ -0.21
CPNE1-201ENST00000317677 DENND1BQ6P3S1 775 aa13.73□□□□□ -0.21
CPNE1-201ENST00000317677 ZDHHC14Q8IZN3 488 aa13.73□□□□□ -0.21
CPNE1-201ENST00000317677 TEKT4Q8WW24 435 aa13.73□□□□□ -0.21
CPNE1-201ENST00000317677 C18orf25Q96B23 403 aaPredicted RBP13.73□□□□□ -0.21
CPNE1-201ENST00000317677 LRRC45Q96CN5 670 aa13.73□□□□□ -0.21
CPNE1-201ENST00000317677 HPDLQ96IR7 371 aa13.73□□□□□ -0.21
CPNE1-201ENST00000317677 ZNF317Q96PQ6 595 aaPredicted RBP13.73□□□□□ -0.21
CPNE1-201ENST00000317677 MTG1Q9BT17 334 aaPredicted RBP13.73□□□□□ -0.21
CPNE1-201ENST00000317677 ADAM22Q9P0K1 906 aa13.73□□□□□ -0.21
CPNE1-201ENST00000317677 GTF2IRD1Q9UHL9 959 aa13.73□□□□□ -0.21
CPNE1-201ENST00000317677 CYTH4Q9UIA0 394 aa13.73□□□□□ -0.21
CPNE1-201ENST00000317677 ANAPC7Q9UJX3 599 aa13.73□□□□□ -0.21
CPNE1-201ENST00000317677 ITGA11Q9UKX5 1188 aa13.73□□□□□ -0.21
CPNE1-201ENST00000317677 PCDHGC3Q9UN70 934 aa13.73□□□□□ -0.21
CPNE1-201ENST00000317677 NME7Q9Y5B8 376 aa13.73□□□□□ -0.21
CPNE1-201ENST00000317677 SEPT4O43236 478 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 RAD51CO43502 376 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 CILPO75339 1184 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 RECQL4O94761 1208 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 HEXIM1O94992 359 aaKnown RBP13.72□□□□□ -0.21
CPNE1-201ENST00000317677 STAU1O95793 577 aaKnown RBP13.72□□□□□ -0.21
CPNE1-201ENST00000317677 PYGBP11216 843 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 MMP8P22894 467 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 AKAP5P24588 427 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 CTNNA2P26232 953 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 CDH5P33151 784 aaPredicted RBP13.72□□□□□ -0.21
CPNE1-201ENST00000317677 CTNNA1P35221 906 aaKnown RBP13.72□□□□□ -0.21
CPNE1-201ENST00000317677 C1QBPQ07021 282 aaKnown RBP13.72□□□□□ -0.21
CPNE1-201ENST00000317677 MAMLD1Q13495 774 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 GLRA4Q5JXX5 417 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 KLHL7Q8IXQ5 586 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 PXYLP1Q8TE99 480 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 ERVK-5Q9HDB9 667 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 PIN4Q9Y237 131 aaKnown RBP13.72□□□□□ -0.21
CPNE1-201ENST00000317677 MIF4GDA9UHW6 222 aaKnown RBP13.72□□□□□ -0.21
CPNE1-201ENST00000317677 BHMG1C9JSJ3 638 aaPredicted RBP13.72□□□□□ -0.21
CPNE1-201ENST00000317677 O00370 1275 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 MYCP01106 439 aaPredicted RBP13.72□□□□□ -0.21
CPNE1-201ENST00000317677 FGGP02679 453 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 ATP2A2P16615 1042 aaKnown RBP13.72□□□□□ -0.21
CPNE1-201ENST00000317677 GUCY2DQ02846 1103 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 PCBP1Q15365 356 aaKnown RBP eCLIP13.72□□□□□ -0.211e-8■■■■■ 45.6
CPNE1-201ENST00000317677 TRADDQ15628 312 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 CCSAPQ6IQ19 270 aaPredicted RBP13.72□□□□□ -0.21
CPNE1-201ENST00000317677 TBC1D1Q86TI0 1168 aaPredicted RBP13.72□□□□□ -0.21
CPNE1-201ENST00000317677 NT5DC4Q86YG4 428 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 ARRDC4Q8NCT1 418 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 APOL6Q9BWW8 343 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 FAM129AQ9BZQ8 928 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 DDX47Q9H0S4 455 aaKnown RBP13.72□□□□□ -0.21
CPNE1-201ENST00000317677 PLEKHA5Q9HAU0 1116 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 CNTN3Q9P232 1028 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 TJP2Q9UDY2 1190 aa13.72□□□□□ -0.21
CPNE1-201ENST00000317677 ATP2C2O75185 946 aa13.71□□□□□ -0.21
CPNE1-201ENST00000317677 PYGMP11217 842 aa13.71□□□□□ -0.21
CPNE1-201ENST00000317677 AXLP30530 894 aa13.71□□□□□ -0.21
CPNE1-201ENST00000317677 RBP5P82980 135 aa13.71□□□□□ -0.21
CPNE1-201ENST00000317677 ZNF844Q08AG5 666 aa13.71□□□□□ -0.21
CPNE1-201ENST00000317677 CUL1Q13616 776 aa13.71□□□□□ -0.21
CPNE1-201ENST00000317677 PPP1R15BQ5SWA1 713 aa13.71□□□□□ -0.21
CPNE1-201ENST00000317677 TRPM8Q7Z2W7 1104 aa13.71□□□□□ -0.21
CPNE1-201ENST00000317677 NME8Q8N427 588 aa13.71□□□□□ -0.21
CPNE1-201ENST00000317677 SMG8Q8ND04 991 aaKnown RBP13.71□□□□□ -0.21
CPNE1-201ENST00000317677 KLHDC9Q8NEP7 349 aa13.71□□□□□ -0.21
CPNE1-201ENST00000317677 CASKIN2Q8WXE0 1202 aa13.71□□□□□ -0.21
CPNE1-201ENST00000317677 TRIM11Q96F44 468 aa13.71□□□□□ -0.21
CPNE1-201ENST00000317677 VCPIP1Q96JH7 1222 aa13.71□□□□□ -0.21
CPNE1-201ENST00000317677 XPO6Q96QU8 1125 aaKnown RBP13.71□□□□□ -0.21
CPNE1-201ENST00000317677 CELF4Q9BZC1 486 aaKnown RBP13.71□□□□□ -0.21
CPNE1-201ENST00000317677 WNT8AQ9H1J5 351 aa13.71□□□□□ -0.21
CPNE1-201ENST00000317677 KLK14Q9P0G3 267 aa13.71□□□□□ -0.21
CPNE1-201ENST00000317677 BLOC1S6Q9UL45 172 aa13.71□□□□□ -0.21
CPNE1-201ENST00000317677 DERAQ9Y315 318 aa13.71□□□□□ -0.21
CPNE1-201ENST00000317677 PCDHA3Q9Y5H8 950 aa13.71□□□□□ -0.21
CPNE1-201ENST00000317677 KRIT1O00522 736 aa13.71□□□□□ -0.22
CPNE1-201ENST00000317677 KPNA6O60684 536 aa13.71□□□□□ -0.22
CPNE1-201ENST00000317677 LSM8O95777 96 aaKnown RBP13.71□□□□□ -0.22
CPNE1-201ENST00000317677 PRKAR2AP13861 404 aaKnown RBP13.71□□□□□ -0.22
CPNE1-201ENST00000317677 EN2P19622 333 aaPredicted RBP13.71□□□□□ -0.22
CPNE1-201ENST00000317677 CYP3A5P20815 502 aa13.71□□□□□ -0.22
CPNE1-201ENST00000317677 HSD17B3P37058 310 aa13.71□□□□□ -0.22
CPNE1-201ENST00000317677 RANBP1P43487 201 aa13.71□□□□□ -0.22
CPNE1-201ENST00000317677 MXRA7P84157 204 aa13.71□□□□□ -0.22
CPNE1-201ENST00000317677 ZNF252P-AS1Q0IIN9 211 aa13.71□□□□□ -0.22
CPNE1-201ENST00000317677 INCA1Q0VD86 236 aa13.71□□□□□ -0.22
CPNE1-201ENST00000317677 MTMR3Q13615 1198 aa13.71□□□□□ -0.22
CPNE1-201ENST00000317677 GALNTL6Q49A17 601 aa13.71□□□□□ -0.22
CPNE1-201ENST00000317677 SMYD5Q6GMV2 418 aa13.71□□□□□ -0.22
CPNE1-201ENST00000317677 SESTD1Q86VW0 696 aa13.71□□□□□ -0.22
CPNE1-201ENST00000317677 LMNTD2Q8IXW0 634 aa13.71□□□□□ -0.22
CPNE1-201ENST00000317677 GBP7Q8N8V2 638 aaPredicted RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms