RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 VAC14Q08AM6 782 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 DMWDQ09019 674 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 COL9A2Q14055 689 aaPredicted RBP8.71□□□□□ -1.02
TPM3-203ENST00000312970 PDGFRLQ15198 375 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 SNRNP35Q16560 246 aaKnown RBP8.71□□□□□ -1.02
TPM3-203ENST00000312970 LPAL2Q16609 132 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 TMEM196Q5HYL7 178 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 FAM26FQ5R3K3 315 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 HEATR6Q6AI08 1181 aaKnown RBP8.71□□□□□ -1.02
TPM3-203ENST00000312970 TRIM68Q6AZZ1 485 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 SHC4Q6S5L8 630 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 VSTM1Q6UX27 236 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 PRR23BQ6ZRT6 265 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 TRAPPC11Q7Z392 1133 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 WDR49Q8IV35 697 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 STKLD1Q8NE28 680 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 KBTBD7Q8WVZ9 684 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 SNX21Q969T3 373 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 EXOC4Q96A65 974 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 SPATA17Q96L03 361 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 CEP295NLQ96MC4 621 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 FNBP1Q96RU3 617 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 HPS4Q9NQG7 708 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 CDV3Q9UKY7 258 aaKnown RBP8.71□□□□□ -1.02
TPM3-203ENST00000312970 USP18Q9UMW8 372 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 DENND4CQ5VZ89 1909 aa8.71□□□□□ -1.02
TPM3-203ENST00000312970 ZNF638Q14966 1978 aaKnown RBP8.71□□□□□ -1.02
TPM3-203ENST00000312970 KIF26AQ9ULI4 1882 aaPredicted RBP8.7□□□□□ -1.02
TPM3-203ENST00000312970 PVALEFA0A1B0GWK0 134 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 CLIC2O15247 247 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 HCRTO43612 131 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 LRP3O75074 770 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 CKMP06732 381 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 DLATP10515 647 aaKnown RBP8.7□□□□□ -1.02
TPM3-203ENST00000312970 ARSAP15289 507 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 DRD1P21728 446 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 BDNFP23560 247 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 CYP27A1Q02318 531 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 SPEM2Q0P670 501 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 NR1H3Q13133 447 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 PSMD6Q15008 389 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 ATL3Q6DD88 541 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 FSTL4Q6MZW2 842 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 UNC13DQ70J99 1090 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 CEP68Q76N32 757 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 HS2ST1Q7LGA3 356 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 WDR5BQ86VZ2 330 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 CPA6Q8N4T0 437 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 ARL14EPQ8N8R7 260 aaPredicted RBP8.7□□□□□ -1.02
TPM3-203ENST00000312970 XXYLT1Q8NBI6 393 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 MYCBPAPQ8TBZ2 947 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 SCFD1Q8WVM8 642 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 CHAMP1Q96JM3 812 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 PHF12Q96QT6 1004 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 SLC22A12Q96S37 553 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 EPAS1Q99814 870 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 P2RY13Q9BPV8 354 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 SYT15Q9BQS2 421 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 SNX25Q9H3E2 840 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 MAGEF1Q9HAY2 307 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 TRPC7Q9HCX4 862 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 PARD6AQ9NPB6 346 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 AGPAT3Q9NRZ7 376 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 C2orf42Q9NWW7 574 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 DUS2Q9NX74 493 aaKnown RBP8.7□□□□□ -1.02
TPM3-203ENST00000312970 FAM13BQ9NYF5 915 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 EHD2Q9NZN4 543 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 CGNQ9P2M7 1197 aaKnown RBP8.7□□□□□ -1.02
TPM3-203ENST00000312970 SLC8A2Q9UPR5 921 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 PTPRJQ12913 1337 aa8.7□□□□□ -1.02
TPM3-203ENST00000312970 LAMA5O15230 3695 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 CCDC163A0A0D9SF12 145 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 C2orf78A6NCI8 922 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 TACC1O75410 805 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 TADA3O75528 432 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 HSP90AA1P07900 732 aaKnown RBP8.69□□□□□ -1.02
TPM3-203ENST00000312970 ZSCAN22P10073 491 aaPredicted RBP8.69□□□□□ -1.02
TPM3-203ENST00000312970 HOXB3P14651 431 aaPredicted RBP8.69□□□□□ -1.02
TPM3-203ENST00000312970 PFKLP17858 780 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 PTPN1P18031 435 aaKnown RBP8.69□□□□□ -1.02
TPM3-203ENST00000312970 ANXA13P27216 316 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 GJA4P35212 333 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 ME1P48163 572 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 PPP3CCP48454 512 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 IFNAR2P48551 515 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 PDE6CP51160 858 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 CYP2J2P51589 502 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 PSMC1P62191 440 aaKnown RBP8.69□□□□□ -1.02
TPM3-203ENST00000312970 CYP24A1Q07973 514 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 EHHADHQ08426 723 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 SRSF5Q13243 272 aaKnown RBP8.69□□□□□ -1.02
TPM3-203ENST00000312970 TRPC3Q13507 836 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 KCNB1Q14721 858 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 MTF1Q14872 753 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 ZNF77Q15935 545 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 CCDC142Q17RM4 750 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 KNOP1Q1ED39 458 aaKnown RBP8.69□□□□□ -1.02
TPM3-203ENST00000312970 WDR72Q3MJ13 1102 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 FOXD4L6Q3SYB3 417 aaPredicted RBP8.69□□□□□ -1.02
TPM3-203ENST00000312970 FBXO43Q4G163 708 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms