RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 CYB561D2O14569 222 aa12.5□□□□□ -0.41
TRIM40-205ENST00000307859 LRCH4O75427 683 aa12.5□□□□□ -0.41
TRIM40-205ENST00000307859 RALAP11233 206 aa12.5□□□□□ -0.41
TRIM40-205ENST00000307859 PTPN7P35236 360 aa12.5□□□□□ -0.41
TRIM40-205ENST00000307859 COILP38432 576 aaPredicted RBP12.5□□□□□ -0.41
TRIM40-205ENST00000307859 TNNT3P45378 269 aaPredicted RBP12.5□□□□□ -0.41
TRIM40-205ENST00000307859 AARSP49588 968 aaKnown RBP eCLIP12.5□□□□□ -0.41
TRIM40-205ENST00000307859 BCAT1P54687 386 aa12.5□□□□□ -0.41
TRIM40-205ENST00000307859 SLC25A11Q02978 314 aaKnown RBP12.5□□□□□ -0.41
TRIM40-205ENST00000307859 PDE4CQ08493 712 aa12.5□□□□□ -0.41
TRIM40-205ENST00000307859 BST2Q10589 180 aaKnown RBP12.5□□□□□ -0.41
TRIM40-205ENST00000307859 TRADDQ15628 312 aa12.5□□□□□ -0.41
TRIM40-205ENST00000307859 FAM102AQ5T9C2 384 aaPredicted RBP12.5□□□□□ -0.41
TRIM40-205ENST00000307859 PMF1Q6P1K2 205 aa12.5□□□□□ -0.41
TRIM40-205ENST00000307859 SND1Q7KZF4 910 aaKnown RBP eCLIP12.5□□□□□ -0.41
TRIM40-205ENST00000307859 ZNF598Q86UK7 904 aaKnown RBP12.5□□□□□ -0.41
TRIM40-205ENST00000307859 JAMLQ86YT9 394 aa12.5□□□□□ -0.41
TRIM40-205ENST00000307859 RCOR2Q8IZ40 523 aa12.5□□□□□ -0.41
TRIM40-205ENST00000307859 ANKRD52Q8NB46 1076 aa12.5□□□□□ -0.41
TRIM40-205ENST00000307859 SLCO2A1Q92959 643 aa12.5□□□□□ -0.41
TRIM40-205ENST00000307859 RBM41Q96IZ5 413 aaKnown RBP12.5□□□□□ -0.41
TRIM40-205ENST00000307859 OSBPL8Q9BZF1 889 aa12.5□□□□□ -0.41
TRIM40-205ENST00000307859 UBN1Q9NPG3 1134 aa12.5□□□□□ -0.41
TRIM40-205ENST00000307859 ST7Q9NRC1 585 aa12.5□□□□□ -0.41
TRIM40-205ENST00000307859 DDX56Q9NY93 547 aaKnown RBP12.5□□□□□ -0.41
TRIM40-205ENST00000307859 HPCAL4Q9UM19 191 aa12.5□□□□□ -0.41
TRIM40-205ENST00000307859 UTP11Q9Y3A2 253 aaKnown RBP12.5□□□□□ -0.41
TRIM40-205ENST00000307859 SCN5AQ14524 2016 aa12.5□□□□□ -0.41
TRIM40-205ENST00000307859 C2CD4BA6NLJ0 364 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 PDGFRBP09619 1106 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 CCDC130P13994 396 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 SSR1P43307 286 aaKnown RBP12.49□□□□□ -0.41
TRIM40-205ENST00000307859 CLCNKBP51801 687 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 ZNF143P52747 638 aaPredicted RBP12.49□□□□□ -0.41
TRIM40-205ENST00000307859 DRG2P55039 364 aaKnown RBP12.49□□□□□ -0.41
TRIM40-205ENST00000307859 SNX16P57768 344 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 COPS2P61201 443 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 GRIK3Q13003 919 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 MBTPS1Q14703 1052 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 UPP1Q16831 310 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 WSCD1Q658N2 575 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 DUPD1Q68J44 220 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 CCDC137Q6PK04 289 aaKnown RBP12.49□□□□□ -0.41
TRIM40-205ENST00000307859 OLFML1Q6UWY5 402 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 ECHDC2Q86YB7 292 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 ZDHHC17Q8IUH5 632 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 CCDC50Q8IVM0 306 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 TMEM86AQ8N2M4 240 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 MREGQ8N565 214 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 ARFGAP1Q8N6T3 406 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 EMC1Q8N766 993 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 B3GALNT2Q8NCR0 500 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 IFT81Q8WYA0 676 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 SENP8Q96LD8 212 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 SLITRK1Q96PX8 696 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 HNRNPABQ99729 332 aaKnown RBP12.49□□□□□ -0.41
TRIM40-205ENST00000307859 LPIN3Q9BQK8 851 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 TRIM51Q9BSJ1 452 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 SEZ6LQ9BYH1 1024 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 FAM114A2Q9NRY5 505 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 RGS18Q9NS28 235 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 CACNG4Q9UBN1 327 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 RASAL2Q9UJF2 1139 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 TET1Q8NFU7 2136 aa12.49□□□□□ -0.41
TRIM40-205ENST00000307859 SPTBN5Q9NRC6 3674 aaKnown RBP12.49□□□□□ -0.41
TRIM40-205ENST00000307859 KBTBD13C9JR72 458 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 DPYSL4O14531 572 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 GABBR2O75899 941 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 KRT1P04264 644 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 COL6A1P12109 1028 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 GPD1P21695 349 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 IGFBP6P24592 240 aaPredicted RBP12.48□□□□□ -0.41
TRIM40-205ENST00000307859 GJC1P36383 396 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 SCNN1AP37088 669 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 CETN2P41208 172 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 RGS7P49802 495 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 SMC1AQ14683 1233 aaKnown RBP12.48□□□□□ -0.41
TRIM40-205ENST00000307859 ATP13A4Q4VNC1 1196 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 TXNRD3NBQ6F5E7 133 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 OR6B2Q6IFH4 312 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 TRNP1Q6NT89 227 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 ANKS1BQ7Z6G8 1248 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 C3orf58Q8NDZ4 430 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 SPATA18Q8TC71 538 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 PIWIL1Q96J94 861 aaKnown RBP12.48□□□□□ -0.41
TRIM40-205ENST00000307859 GDAP1L1Q96MZ0 367 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 ERP44Q9BS26 406 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 CNPY3Q9BT09 278 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 ACBD3Q9H3P7 528 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 HOMER3Q9NSC5 361 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 ZNF638Q14966 1978 aaKnown RBP12.48□□□□□ -0.41
TRIM40-205ENST00000307859 MICAL3Q7RTP6 2002 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 VWA8A3KMH1 1905 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 TMEM265A0A087WTH1 108 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 CASTOR2A6NHX0 329 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 C9IYK1 514 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 DNM1LO00429 736 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 PAPSS1O43252 624 aaPredicted RBP12.48□□□□□ -0.41
TRIM40-205ENST00000307859 DAPK3O43293 454 aa12.48□□□□□ -0.41
TRIM40-205ENST00000307859 KRT7P08729 469 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms