RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 ZMIZ2Q8NF64 920 aa25.89■■□□□ 1.74
HOXC9-201ENST00000303450 UBA3Q8TBC4 463 aa25.89■■□□□ 1.74
HOXC9-201ENST00000303450 RIPOR3Q96MK2 946 aa25.89■■□□□ 1.74
HOXC9-201ENST00000303450 CORO1BQ9BR76 489 aa25.89■■□□□ 1.74
HOXC9-201ENST00000303450 HCFC1R1Q9NWW0 138 aa25.89■■□□□ 1.74
HOXC9-201ENST00000303450 CAPN11Q9UMQ6 739 aa25.89■■□□□ 1.74
HOXC9-201ENST00000303450 LUC7L2Q9Y383 392 aaKnown RBP25.89■■□□□ 1.74
HOXC9-201ENST00000303450 C2orf16Q68DN1 1984 aa25.89■■□□□ 1.73
HOXC9-201ENST00000303450 SLC38A8A6NNN8 435 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 GYPCP04921 128 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 TPM1P09493 284 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 FERP16591 822 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 KRT9P35527 623 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 SMAD4Q13485 552 aaKnown RBP25.88■■□□□ 1.73
HOXC9-201ENST00000303450 LEXMQ3ZCV2 418 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 DENND5BQ6ZUT9 1274 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 STKLD1Q8NE28 680 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 THEGQ9P2T0 379 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 DNMT3BQ9UBC3 853 aaKnown RBP25.88■■□□□ 1.73
HOXC9-201ENST00000303450 CDH22Q9UJ99 828 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 MAGED2Q9UNF1 606 aaPredicted RBP25.88■■□□□ 1.73
HOXC9-201ENST00000303450 GOLGA6L3A6NEY3 463 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 MTHFRP42898 656 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 ZBED6P86452 979 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 TFF2Q03403 129 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 PDE4CQ08493 712 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 MTMR3Q13615 1198 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 SFMBT2Q5VUG0 894 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 TMC6Q7Z403 805 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 NUCKS1Q9H1E3 243 aaKnown RBP25.88■■□□□ 1.73
HOXC9-201ENST00000303450 PDCL3Q9H2J4 239 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 ASAH2Q9NR71 780 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 USP15Q9Y4E8 981 aaPredicted RBP25.88■■□□□ 1.73
HOXC9-201ENST00000303450 COL6A3P12111 3177 aa25.88■■□□□ 1.73
HOXC9-201ENST00000303450 DOCK6Q96HP0 2047 aa25.87■■□□□ 1.73
HOXC9-201ENST00000303450 XIRP2A4UGR9 3374 aa25.87■■□□□ 1.73
HOXC9-201ENST00000303450 SETSIPP0DME0 302 aa25.87■■□□□ 1.73
HOXC9-201ENST00000303450 CASP14P31944 242 aa25.87■■□□□ 1.73
HOXC9-201ENST00000303450 MEA1Q16626 185 aa25.87■■□□□ 1.73
HOXC9-201ENST00000303450 PABPC1LQ4VXU2 614 aaKnown RBP25.87■■□□□ 1.73
HOXC9-201ENST00000303450 PKDCCQ504Y2 493 aa25.87■■□□□ 1.73
HOXC9-201ENST00000303450 CYP4A22Q5TCH4 519 aa25.87■■□□□ 1.73
HOXC9-201ENST00000303450 NOP9Q86U38 636 aaKnown RBP25.87■■□□□ 1.73
HOXC9-201ENST00000303450 NUP93Q8N1F7 819 aa25.87■■□□□ 1.73
HOXC9-201ENST00000303450 EPS8L1Q8TE68 723 aa25.87■■□□□ 1.73
HOXC9-201ENST00000303450 PNPLA8Q9NP80 782 aa25.87■■□□□ 1.73
HOXC9-201ENST00000303450 EHD2Q9NZN4 543 aa25.87■■□□□ 1.73
HOXC9-201ENST00000303450 XPO1O14980 1071 aaKnown RBP25.86■■□□□ 1.73
HOXC9-201ENST00000303450 RHOP08100 348 aa25.86■■□□□ 1.73
HOXC9-201ENST00000303450 ASIC2Q16515 512 aa25.86■■□□□ 1.73
HOXC9-201ENST00000303450 TAF3Q5VWG9 929 aa25.86■■□□□ 1.73
HOXC9-201ENST00000303450 ZNF677Q86XU0 584 aa25.86■■□□□ 1.73
HOXC9-201ENST00000303450 HS6ST3Q8IZP7 471 aa25.86■■□□□ 1.73
HOXC9-201ENST00000303450 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.86■■□□□ 1.73
HOXC9-201ENST00000303450 SECISBP2LQ93073 1101 aaKnown RBP25.86■■□□□ 1.73
HOXC9-201ENST00000303450 NECTIN4Q96NY8 510 aa25.86■■□□□ 1.73
HOXC9-201ENST00000303450 UBXN6Q9BZV1 441 aa25.86■■□□□ 1.73
HOXC9-201ENST00000303450 PCDHGC3Q9UN70 934 aa25.86■■□□□ 1.73
HOXC9-201ENST00000303450 GRXCR2A6NFK2 248 aa25.85■■□□□ 1.73
HOXC9-201ENST00000303450 MBTPS2O43462 519 aa25.85■■□□□ 1.73
HOXC9-201ENST00000303450 RTN3O95197 1032 aaPredicted RBP25.85■■□□□ 1.73
HOXC9-201ENST00000303450 CFHP08603 1231 aa25.85■■□□□ 1.73
HOXC9-201ENST00000303450 HMGA1P17096 107 aaKnown RBP25.85■■□□□ 1.73
HOXC9-201ENST00000303450 SLC5A3P53794 718 aa25.85■■□□□ 1.73
HOXC9-201ENST00000303450 NTHL1P78549 312 aa25.85■■□□□ 1.73
HOXC9-201ENST00000303450 IFRD2Q12894 506 aaPredicted RBP25.85■■□□□ 1.73
HOXC9-201ENST00000303450 PUS10Q3MIT2 529 aaKnown RBP25.85■■□□□ 1.73
HOXC9-201ENST00000303450 DENND1BQ6P3S1 775 aa25.85■■□□□ 1.73
HOXC9-201ENST00000303450 PDZD4Q76G19 769 aaPredicted RBP25.85■■□□□ 1.73
HOXC9-201ENST00000303450 PIGZQ86VD9 579 aa25.85■■□□□ 1.73
HOXC9-201ENST00000303450 LEMD2Q8NC56 503 aa25.85■■□□□ 1.73
HOXC9-201ENST00000303450 SUSD6Q92537 303 aa25.85■■□□□ 1.73
HOXC9-201ENST00000303450 WDR6Q9NNW5 1121 aaKnown RBP25.85■■□□□ 1.73
HOXC9-201ENST00000303450 AIPL1Q9NZN9 384 aa25.85■■□□□ 1.73
HOXC9-201ENST00000303450 GREB1Q4ZG55 1949 aa25.84■■□□□ 1.73
HOXC9-201ENST00000303450 TNFRSF10BO14763 440 aa25.84■■□□□ 1.73
HOXC9-201ENST00000303450 ADCY5O95622 1261 aa25.84■■□□□ 1.73
HOXC9-201ENST00000303450 MYL4P12829 197 aa25.84■■□□□ 1.73
HOXC9-201ENST00000303450 CBX2Q14781 532 aaPredicted RBP25.84■■□□□ 1.73
HOXC9-201ENST00000303450 AAK1Q2M2I8 961 aa25.84■■□□□ 1.73
HOXC9-201ENST00000303450 PTCRAQ6ISU1 281 aaPredicted RBP25.84■■□□□ 1.73
HOXC9-201ENST00000303450 IRF2BP2Q7Z5L9 587 aa25.84■■□□□ 1.73
HOXC9-201ENST00000303450 PASD1Q8IV76 773 aa25.84■■□□□ 1.73
HOXC9-201ENST00000303450 SLC20A1Q8WUM9 679 aa25.84■■□□□ 1.73
HOXC9-201ENST00000303450 DDX1Q92499 740 aaKnown RBP25.84■■□□□ 1.73
HOXC9-201ENST00000303450 UXTQ9UBK9 157 aaPredicted RBP25.84■■□□□ 1.73
HOXC9-201ENST00000303450 NOCTQ9UK39 431 aaKnown RBP25.84■■□□□ 1.73
HOXC9-201ENST00000303450 CEP83Q9Y592 693 aa25.84■■□□□ 1.73
HOXC9-201ENST00000303450 HHLA1C9JL84 531 aa25.83■■□□□ 1.73
HOXC9-201ENST00000303450 TULP2O00295 520 aa25.83■■□□□ 1.73
HOXC9-201ENST00000303450 GPD2P43304 727 aa25.83■■□□□ 1.73
HOXC9-201ENST00000303450 PLA2G4AP47712 749 aa25.83■■□□□ 1.73
HOXC9-201ENST00000303450 USP46P62068 366 aa25.83■■□□□ 1.73
HOXC9-201ENST00000303450 CDR2Q01850 454 aa25.83■■□□□ 1.73
HOXC9-201ENST00000303450 TMC8Q8IU68 726 aa25.83■■□□□ 1.73
HOXC9-201ENST00000303450 SCAMP5Q8TAC9 235 aa25.83■■□□□ 1.73
HOXC9-201ENST00000303450 SLC35F5Q8WV83 523 aa25.83■■□□□ 1.73
HOXC9-201ENST00000303450 TRMT2BQ96GJ1 504 aaKnown RBP25.83■■□□□ 1.73
HOXC9-201ENST00000303450 MYRFLQ96LU7 910 aa25.83■■□□□ 1.73
HOXC9-201ENST00000303450 LRRC3Q9BY71 257 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms