RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 FAM35AQ86V20 835 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 VPS36Q86VN1 386 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 ZDHHC17Q8IUH5 632 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 NUP93Q8N1F7 819 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 C12orf29Q8N999 325 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 TMEM35BQ8NCS4 154 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 MSANTD4Q8NCY6 345 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 OR8K1Q8NGG5 319 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 SUSD6Q92537 303 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 BAP1Q92560 729 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 KAT5Q92993 513 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 PGLYRP2Q96PD5 576 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 TMEM209Q96SK2 561 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 SEPT5Q99719 369 aaPredicted RBP9.36□□□□□ -0.91
VPREB1-201ENST00000302273 MED10Q9BTT4 135 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 TRIM62Q9BVG3 475 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 TTLL2Q9BWV7 592 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 UBE2ZQ9H832 354 aaPredicted RBP9.36□□□□□ -0.91
VPREB1-201ENST00000302273 WDR6Q9NNW5 1121 aaKnown RBP9.36□□□□□ -0.91
VPREB1-201ENST00000302273 ZNHIT6Q9NWK9 470 aaKnown RBP9.36□□□□□ -0.91
VPREB1-201ENST00000302273 HMGXB4Q9UGU5 601 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 CD207Q9UJ71 328 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 TSPAN16Q9UKR8 245 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 YIPF1Q9Y548 306 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 NLRC5Q86WI3 1866 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 GBF1Q92538 1859 aa9.36□□□□□ -0.91
VPREB1-201ENST00000302273 TRIP11Q15643 1979 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 GOLGA6L6A8MZA4 724 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 EPHB6O15197 1021 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 AP5Z1O43299 807 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 ZNF500O60304 480 aaPredicted RBP9.35□□□□□ -0.91
VPREB1-201ENST00000302273 AP1G2O75843 785 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 FBXO21O94952 628 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 PTMAP06454 111 aaKnown RBP9.35□□□□□ -0.91
VPREB1-201ENST00000302273 DDX6P26196 483 aaKnown RBP eCLIP9.35□□□□□ -0.91
VPREB1-201ENST00000302273 CDC25CP30307 473 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 SCN1AP35498 2009 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 GPD2P43304 727 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 TUBP50607 506 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 ZNF75DP51815 510 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 PLCB2Q00722 1185 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 TWF1Q12792 350 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 SKIV2LQ15477 1246 aaKnown RBP9.35□□□□□ -0.91
VPREB1-201ENST00000302273 RAB41Q5JT25 222 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 SNX30Q5VWJ9 437 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 GJB7Q6PEY0 223 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 CLEC20AQ6ZU45 233 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 BEND5Q7L4P6 421 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 IRF2BP2Q7Z5L9 587 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 TMEM110Q86TL2 294 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 MON1AQ86VX9 555 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 GLYCTKQ8IVS8 523 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 ARHGAP18Q8N392 663 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 EPS8L1Q8TE68 723 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 TFAP2BQ92481 460 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 SMG7Q92540 1137 aaKnown RBP9.35□□□□□ -0.91
VPREB1-201ENST00000302273 TTC28Q96AY4 2481 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 ZNF707Q96C28 371 aaPredicted RBP9.35□□□□□ -0.91
VPREB1-201ENST00000302273 SLITRK1Q96PX8 696 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 CDK5RAP1Q96SZ6 601 aaKnown RBP9.35□□□□□ -0.91
VPREB1-201ENST00000302273 DNAJC7Q99615 494 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 PIDD1Q9HB75 910 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 NLRC4Q9NPP4 1024 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 CNGB3Q9NQW8 809 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.35□□□□□ -0.91
VPREB1-201ENST00000302273 ASAH2Q9NR71 780 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 KRT82Q9NSB4 513 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 FAM49BQ9NUQ9 324 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 GDE1Q9NZC3 331 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 PRKAG3Q9UGI9 489 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 SLC27A5Q9Y2P5 690 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 USP3Q9Y6I4 520 aa9.35□□□□□ -0.91
VPREB1-201ENST00000302273 KIAA1671Q9BY89 1806 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 LRRC53A6NM62 1247 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 SLC38A8A6NNN8 435 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 F8VP50 259 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 TNFRSF10BO14763 440 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 THAP12O43422 761 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 TBX10O75333 385 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 GYPCP04921 128 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 SERPING1P05155 500 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 SPATA31D3P0C874 917 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 GZMAP12544 262 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 CCDC130P13994 396 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 ATF6P18850 670 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 KCNA5P22460 613 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 GTF2F1P35269 517 aaKnown RBP eCLIP9.34□□□□□ -0.91
VPREB1-201ENST00000302273 SCNN1AP37088 669 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 KLK7P49862 253 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 KIF11P52732 1056 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 APBA1Q02410 837 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 TBX2Q13207 712 aaPredicted RBP9.34□□□□□ -0.91
VPREB1-201ENST00000302273 CBX2Q14781 532 aaPredicted RBP9.34□□□□□ -0.91
VPREB1-201ENST00000302273 PM20D1Q6GTS8 502 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 LLGL2Q6P1M3 1020 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 SPATA31D4Q6ZUB0 917 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 PDZD4Q76G19 769 aaPredicted RBP9.34□□□□□ -0.91
VPREB1-201ENST00000302273 ARCQ7LC44 396 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 OTOP3Q7RTS5 596 aa9.34□□□□□ -0.91
VPREB1-201ENST00000302273 TADA2BQ86TJ2 420 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms