RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 KRT38O76015 456 aa14.67□□□□□ -0.06
SDC2-201ENST00000302190 CST3P01034 146 aaPredicted RBP14.67□□□□□ -0.06
SDC2-201ENST00000302190 PEX5P50542 639 aa14.67□□□□□ -0.06
SDC2-201ENST00000302190 TMEM154Q6P9G4 183 aa14.67□□□□□ -0.06
SDC2-201ENST00000302190 GPC2Q8N158 579 aa14.67□□□□□ -0.06
SDC2-201ENST00000302190 ASAP3Q8TDY4 903 aa14.67□□□□□ -0.06
SDC2-201ENST00000302190 TLCD1Q96CP7 247 aa14.67□□□□□ -0.06
SDC2-201ENST00000302190 CLMNQ96JQ2 1002 aa14.67□□□□□ -0.06
SDC2-201ENST00000302190 DMAC2Q9NW81 257 aa14.67□□□□□ -0.06
SDC2-201ENST00000302190 VWA5AO00534 786 aa14.66□□□□□ -0.06
SDC2-201ENST00000302190 DNALI1O14645 258 aaPredicted RBP14.66□□□□□ -0.06
SDC2-201ENST00000302190 FSCN2O14926 492 aa14.66□□□□□ -0.06
SDC2-201ENST00000302190 DRG2P55039 364 aaKnown RBP14.66□□□□□ -0.06
SDC2-201ENST00000302190 SLC9A9Q8IVB4 645 aa14.66□□□□□ -0.06
SDC2-201ENST00000302190 WDR75Q8IWA0 830 aaKnown RBP14.66□□□□□ -0.06
SDC2-201ENST00000302190 PPIL6Q8IXY8 311 aa14.66□□□□□ -0.06
SDC2-201ENST00000302190 WNK4Q96J92 1243 aa14.66□□□□□ -0.06
SDC2-201ENST00000302190 PSTPIP1O43586 416 aa14.66□□□□□ -0.06
SDC2-201ENST00000302190 GCNT1Q02742 428 aa14.66□□□□□ -0.06
SDC2-201ENST00000302190 ZC3H12AQ5D1E8 599 aaKnown RBP14.66□□□□□ -0.06
SDC2-201ENST00000302190 RABGAP1LQ5R372 815 aa14.66□□□□□ -0.06
SDC2-201ENST00000302190 ANKRD20A2Q5SQ80 823 aa14.66□□□□□ -0.06
SDC2-201ENST00000302190 ANKRD20A1Q5TYW2 823 aa14.66□□□□□ -0.06
SDC2-201ENST00000302190 DNAJC9Q8WXX5 260 aa14.66□□□□□ -0.06
SDC2-201ENST00000302190 DDX56Q9NY93 547 aaKnown RBP14.66□□□□□ -0.06
SDC2-201ENST00000302190 C15orf41Q9Y2V0 281 aa14.66□□□□□ -0.06
SDC2-201ENST00000302190 KIF13BQ9NQT8 1826 aa14.66□□□□□ -0.06
SDC2-201ENST00000302190 TXNP10599 105 aaKnown RBP14.65□□□□□ -0.06
SDC2-201ENST00000302190 TYK2P29597 1187 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 C15orf59Q2T9L4 293 aaPredicted RBP14.65□□□□□ -0.06
SDC2-201ENST00000302190 HEATR6Q6AI08 1181 aaKnown RBP14.65□□□□□ -0.06
SDC2-201ENST00000302190 CATSPER4Q7RTX7 472 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 MRIQ9BWK5 157 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 UNKQ9C0B0 810 aaKnown RBP14.65□□□□□ -0.06
SDC2-201ENST00000302190 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.65□□□□□ -0.066e-9■■□□□ 12.7
SDC2-201ENST00000302190 ATP5HO75947 161 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 GARTP22102 1010 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 ABCG1P45844 678 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 VCPP55072 806 aaKnown RBP14.65□□□□□ -0.06
SDC2-201ENST00000302190 CRADDP78560 199 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 ITKQ08881 620 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 PTK6Q13882 451 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 ATF7IP2Q5U623 682 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 ZDHHC14Q8IZN3 488 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 POU5F2Q8N7G0 328 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 ZNF75CPQ92670 426 aaPredicted RBP14.65□□□□□ -0.06
SDC2-201ENST00000302190 CPB2Q96IY4 423 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 KLHL8Q9P2G9 620 aaPredicted RBP14.65□□□□□ -0.06
SDC2-201ENST00000302190 TELO2Q9Y4R8 837 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 A8MXQ7 604 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 KBTBD13C9JR72 458 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 SLC4A1P02730 911 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 FAAP100Q0VG06 881 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 SLC1A5Q15758 541 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 ATG16L1Q676U5 607 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 TXNRD3NBQ6F5E7 133 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 EFCAB12Q6NXP0 572 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 FOXR2Q6PJQ5 311 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 CES3Q6UWW8 571 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 ECHDC2Q86YB7 292 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 AGGF1Q8N302 714 aaeCLIP14.65□□□□□ -0.06
SDC2-201ENST00000302190 TTC8Q8TAM2 541 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 SEPT1Q8WYJ6 367 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 SENP1Q9P0U3 644 aa14.65□□□□□ -0.06
SDC2-201ENST00000302190 SUPT20HL2P0C7V6 817 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 SETSIPP0DME0 302 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 GHRP10912 638 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 MYBPC2Q14324 1141 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 KBTBD12Q3ZCT8 623 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 SUPT20HL1Q3ZLR7 823 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 FAM47CQ5HY64 1035 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 DPY19L2Q6NUT2 758 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 BZW1Q7L1Q6 419 aaKnown RBP14.64□□□□□ -0.07
SDC2-201ENST00000302190 PID1Q7Z2X4 250 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 APOL2Q9BQE5 337 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 DNAI2Q9GZS0 605 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 LRRC4Q9HBW1 653 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 PACSIN3Q9UKS6 424 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 APOBEC2Q9Y235 224 aaKnown RBP14.64□□□□□ -0.07
SDC2-201ENST00000302190 ATXN2Q99700 1313 aaKnown RBP14.64□□□□□ -0.07
SDC2-201ENST00000302190 MYH4Q9Y623 1939 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 CCDC22O60826 627 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 DGKIO75912 1065 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 DNAJC8O75937 253 aaPredicted RBP14.64□□□□□ -0.07
SDC2-201ENST00000302190 OSBPP22059 807 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 SOX11P35716 441 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 SLC12A2P55011 1212 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 BACE1P56817 501 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 ZNF280AP59817 542 aaPredicted RBP14.64□□□□□ -0.07
SDC2-201ENST00000302190 LAMB3Q13751 1172 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 DENND1BQ6P3S1 775 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 ACOT1Q86TX2 421 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 CCNYL1Q8N7R7 359 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 ATXN2LQ8WWM7 1075 aaKnown RBP14.64□□□□□ -0.07
SDC2-201ENST00000302190 TIPINQ9BVW5 301 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 TBC1D10AQ9BXI6 508 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 GOLGA4Q13439 2230 aaKnown RBP14.64□□□□□ -0.07
SDC2-201ENST00000302190 NVLO15381 856 aaKnown RBP14.64□□□□□ -0.07
SDC2-201ENST00000302190 HSPA4LO95757 839 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 NOMO3P69849 1222 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms