RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 RASAL2Q9UJF2 1139 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 TRIM17Q9Y577 477 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.43■■□□□ 1.34
SMAD1-201ENST00000302085 SKIP12755 728 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 PDGFRAP16234 1089 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 FLT3P36888 993 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 CETN2P41208 172 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 DRG2P55039 364 aaKnown RBP23.43■■□□□ 1.34
SMAD1-201ENST00000302085 HNRNPABQ99729 332 aaKnown RBP23.43■■□□□ 1.34
SMAD1-201ENST00000302085 B3GNT5Q9BYG0 378 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 ASNSD1Q9NWL6 643 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 SNX24Q9Y343 169 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 C3orf70A6NLC5 250 aaPredicted RBP23.42■■□□□ 1.34
SMAD1-201ENST00000302085 MIPP30301 263 aa23.42■■□□□ 1.34
SMAD1-201ENST00000302085 AARSP49588 968 aaKnown RBP eCLIP23.42■■□□□ 1.34
SMAD1-201ENST00000302085 COPS2P61201 443 aa23.42■■□□□ 1.34
SMAD1-201ENST00000302085 HADHQ16836 314 aaKnown RBP23.42■■□□□ 1.34
SMAD1-201ENST00000302085 SH3PXD2AQ5TCZ1 1133 aa23.42■■□□□ 1.34
SMAD1-201ENST00000302085 SLCO2A1Q92959 643 aa23.42■■□□□ 1.34
SMAD1-201ENST00000302085 CNPY3Q9BT09 278 aa23.42■■□□□ 1.34
SMAD1-201ENST00000302085 ACBD3Q9H3P7 528 aa23.42■■□□□ 1.34
SMAD1-201ENST00000302085 UBN1Q9NPG3 1134 aa23.42■■□□□ 1.34
SMAD1-201ENST00000302085 RGS18Q9NS28 235 aa23.42■■□□□ 1.34
SMAD1-201ENST00000302085 PTPN22Q9Y2R2 807 aa23.42■■□□□ 1.34
SMAD1-201ENST00000302085 HTTP42858 3142 aa23.42■■□□□ 1.34
SMAD1-201ENST00000302085 FRMPD3Q5JV73 1810 aa23.42■■□□□ 1.34
SMAD1-201ENST00000302085 DNAH12Q6ZR08 3092 aa23.42■■□□□ 1.34
SMAD1-201ENST00000302085 KRT7P08729 469 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 OAS2P29728 719 aaKnown RBP23.41■■□□□ 1.34
SMAD1-201ENST00000302085 PTPN7P35236 360 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 SNX16P57768 344 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 CD300LGQ6UXG3 332 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 DSTYKQ6XUX3 929 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 PAQR9Q6ZVX9 377 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 FUKQ8N0W3 1084 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 MREGQ8N565 214 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 PCSK1NQ9UHG2 260 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 TIMM13Q9Y5L4 95 aaPredicted RBP23.41■■□□□ 1.34
SMAD1-201ENST00000302085 LRRD1A4D1F6 860 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 AGPSO00116 658 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 RNF8O76064 485 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 TRUB2O95900 331 aaKnown RBP23.41■■□□□ 1.34
SMAD1-201ENST00000302085 CDKN2BP42772 138 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 CCDC14Q49A88 953 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 TIGD5Q53EQ6 642 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 RAB6CQ53S08 254 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 KCNT1Q5JUK3 1230 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 KAZNQ674X7 775 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 TMEM86AQ8N2M4 240 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 RAB6CQ9H0N0 254 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 UNC93B1Q9H1C4 597 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 HOMER3Q9NSC5 361 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 DDX43Q9NXZ2 648 aaKnown RBP23.41■■□□□ 1.34
SMAD1-201ENST00000302085 INPP5FQ9Y2H2 1132 aa23.41■■□□□ 1.34
SMAD1-201ENST00000302085 hCG_1818297A0A087WSY0 165 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 CLDN5O00501 218 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 ECEL1O95672 775 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 RPL21P46778 160 aaKnown RBP23.4■■□□□ 1.34
SMAD1-201ENST00000302085 CDK7P50613 346 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 GPS2Q13227 327 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 CCNG2Q16589 344 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 C15orf59Q2T9L4 293 aaPredicted RBP23.4■■□□□ 1.34
SMAD1-201ENST00000302085 SMTNL2Q2TAL5 461 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 ZDHHC17Q8IUH5 632 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 FAM118BQ9BPY3 351 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 DUSP16Q9BY84 665 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 CRTAC1Q9NQ79 661 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 ZDHHC18Q9NUE0 388 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 C9IYK1 514 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 KBTBD13C9JR72 458 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 DPYSL4O14531 572 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 PCK1P35558 622 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 HSPA9P38646 679 aaKnown RBP23.4■■□□□ 1.34
SMAD1-201ENST00000302085 GRIK3Q13003 919 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 ODF2Q5BJF6 829 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 TFDP3Q5H9I0 405 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 CLEC4CQ8WTT0 213 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 CYLDQ9NQC7 956 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 GRHL1Q9NZI5 618 aa23.4■■□□□ 1.34
SMAD1-201ENST00000302085 LCP1P13796 627 aa23.39■■□□□ 1.33
SMAD1-201ENST00000302085 KDELR1P24390 212 aa23.39■■□□□ 1.33
SMAD1-201ENST00000302085 LHX1P48742 406 aa23.39■■□□□ 1.33
SMAD1-201ENST00000302085 MDH1BQ5I0G3 518 aa23.39■■□□□ 1.33
SMAD1-201ENST00000302085 ZDHHC24Q6UX98 284 aa23.39■■□□□ 1.33
SMAD1-201ENST00000302085 ATL2Q8NHH9 583 aa23.39■■□□□ 1.33
SMAD1-201ENST00000302085 LINC01599Q8WXQ3 324 aa23.39■■□□□ 1.33
SMAD1-201ENST00000302085 HSFY1Q96LI6 401 aa23.39■■□□□ 1.33
SMAD1-201ENST00000302085 CFAP57Q96MR6 1250 aa23.39■■□□□ 1.33
SMAD1-201ENST00000302085 PEBP4Q96S96 227 aa23.39■■□□□ 1.33
SMAD1-201ENST00000302085 USP18Q9UMW8 372 aa23.39■■□□□ 1.33
SMAD1-201ENST00000302085 I3L4J1 428 aa23.38■■□□□ 1.33
SMAD1-201ENST00000302085 XPO1O14980 1071 aaKnown RBP23.38■■□□□ 1.33
SMAD1-201ENST00000302085 INPPL1O15357 1258 aa23.38■■□□□ 1.33
SMAD1-201ENST00000302085 TJP3O95049 919 aa23.38■■□□□ 1.33
SMAD1-201ENST00000302085 SYF2O95926 243 aaKnown RBP23.38■■□□□ 1.33
SMAD1-201ENST00000302085 YY1P25490 414 aa23.38■■□□□ 1.33
SMAD1-201ENST00000302085 GGCXP38435 758 aa23.38■■□□□ 1.33
SMAD1-201ENST00000302085 CDR1P51861 262 aa23.38■■□□□ 1.33
SMAD1-201ENST00000302085 FAM189BP81408 668 aa23.38■■□□□ 1.33
SMAD1-201ENST00000302085 TUSC3Q13454 348 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms