RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 KRT34O76011 436 aa11.69□□□□□ -0.54
GCN1-201ENST00000300648 GZMAP12544 262 aa11.69□□□□□ -0.54
GCN1-201ENST00000300648 NFIAQ12857 509 aa11.69□□□□□ -0.54
GCN1-201ENST00000300648 ARID3BQ8IVW6 561 aaPredicted RBP11.69□□□□□ -0.54
GCN1-201ENST00000300648 SH2D3CQ8N5H7 860 aa11.69□□□□□ -0.54
GCN1-201ENST00000300648 USP33Q8TEY7 942 aa11.69□□□□□ -0.54
GCN1-201ENST00000300648 ACAD9Q9H845 621 aa11.69□□□□□ -0.54
GCN1-201ENST00000300648 NEDD4P46934 1319 aa11.69□□□□□ -0.54
GCN1-201ENST00000300648 TMEM114B3SHH9 223 aa11.69□□□□□ -0.54
GCN1-201ENST00000300648 DYRK3O43781 588 aa11.69□□□□□ -0.54
GCN1-201ENST00000300648 TSPAN9O75954 239 aa11.69□□□□□ -0.54
GCN1-201ENST00000300648 HK2P52789 917 aa11.69□□□□□ -0.54
GCN1-201ENST00000300648 PTRHD1Q6GMV3 140 aaKnown RBP11.69□□□□□ -0.54
GCN1-201ENST00000300648 CRELD2Q6UXH1 353 aaPredicted RBP11.69□□□□□ -0.54
GCN1-201ENST00000300648 SLC7A14Q8TBB6 771 aa11.69□□□□□ -0.54
GCN1-201ENST00000300648 MCEEQ96PE7 176 aa11.69□□□□□ -0.54
GCN1-201ENST00000300648 NT5C1AQ9BXI3 368 aa11.69□□□□□ -0.54
GCN1-201ENST00000300648 MYH6P13533 1939 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 C19orf81C9J6K1 198 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 LSM8O95777 96 aaKnown RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 AKT1P31749 480 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 COILP38432 576 aaPredicted RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 PRKG1Q13976 671 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 CCDC81Q6ZN84 652 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 ANKMY2Q8IV38 441 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 EID3Q8N140 333 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 C4orf33Q8N1A6 199 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 MARCOQ9UEW3 520 aaPredicted RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 COL15A1P39059 1388 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 F8W810 466 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 RGL2O15211 777 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 PDGFRAP16234 1089 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 LTKP29376 864 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 NCOA4Q13772 614 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 OASLQ15646 514 aaKnown RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 IRGCQ6NXR0 463 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 ZCCHC7Q8N3Z6 543 aaKnown RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 S100ZQ8WXG8 99 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 ZNF184Q99676 751 aaPredicted RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 AVENQ9NQS1 362 aaPredicted RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 BCAP31P51572 246 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 ARPP19P56211 112 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 SV2CQ496J9 727 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 ATAD3BQ5T9A4 648 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 ZCCHC8Q6NZY4 707 aaKnown RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 SHC4Q6S5L8 630 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 CCDC33Q8N5R6 958 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 RORBQ92753 470 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 UGT2B28Q9BY64 529 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 DMAP1Q9NPF5 467 aaPredicted RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 DNAJC5BQ9UF47 199 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 ZC3H4Q9UPT8 1303 aaKnown RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 TEX33O43247 280 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 SORBS3O60504 671 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 NPM3O75607 178 aaKnown RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 ETFBP38117 255 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 SARSP49591 514 aaKnown RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 ST8SIA6P61647 398 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 SHROOM1Q2M3G4 852 aaPredicted RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 ZNF746Q6NUN9 644 aaPredicted RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 DENND1BQ6P3S1 775 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 RFX8Q6ZV50 586 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 AGR3Q8TD06 166 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 DNAJC7Q99615 494 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 SLC7A5P2Q9GIP4 190 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 ATP9BO43861 1147 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 TGM2P21980 687 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 DYNLL1P63167 89 aaKnown RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 MZT2BQ6NZ67 158 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 KIF12Q96FN5 646 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 TMCO1Q9UM00 188 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 NEURL4Q96JN8 1562 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 VPS26AO75436 327 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 DNAJB2P25686 324 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 EIF2B2P49770 351 aaKnown RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 RIPPLY1Q0D2K3 151 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 KIZQ2M2Z5 673 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 ZNF394Q53GI3 561 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 C2CD6Q53TS8 623 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 RSBN1Q5VWQ0 802 aaPredicted RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 ZSWIM1Q9BR11 485 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 TRMT6Q9UJA5 497 aaKnown RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 ABCA6Q8N139 1617 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 LARGE1O95461 756 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 XRCC4Q13426 336 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 TOP3AQ13472 1001 aaPredicted RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 MFSD14CQ5VZR4 134 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 C11orf63Q6NUN7 778 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 ZBTB49Q6ZSB9 765 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 TSEN34Q9BSV6 310 aaKnown RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 MLPHQ9BV36 600 aaPredicted RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 FAM217BQ9NTX9 383 aaPredicted RBP11.68□□□□□ -0.54
GCN1-201ENST00000300648 PLAGL2Q9UPG8 496 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 SHOC2Q9UQ13 582 aa11.68□□□□□ -0.54
GCN1-201ENST00000300648 CDK7P50613 346 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 Q3C1V9 767 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 XKR3Q5GH77 459 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 RNFT2Q96EX2 444 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.67□□□□□ -0.54
GCN1-201ENST00000300648 H2AFXP16104 143 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms