RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 ZNF280BQ86YH2 543 aa16.52■□□□□ 0.23
HERPUD1-201ENST00000300302 SCUBE3Q8IX30 993 aa16.52■□□□□ 0.23
HERPUD1-201ENST00000300302 THEM5Q8N1Q8 247 aa16.52■□□□□ 0.23
HERPUD1-201ENST00000300302 ANKLE1Q8NAG6 615 aa16.52■□□□□ 0.23
HERPUD1-201ENST00000300302 HASPINQ8TF76 798 aa16.52■□□□□ 0.23
HERPUD1-201ENST00000300302 CNPY3Q9BT09 278 aa16.52■□□□□ 0.23
HERPUD1-201ENST00000300302 CRTAC1Q9NQ79 661 aa16.52■□□□□ 0.23
HERPUD1-201ENST00000300302 TANC1Q9C0D5 1861 aa16.52■□□□□ 0.23
HERPUD1-201ENST00000300302 C2CD4BA6NLJ0 364 aa16.51■□□□□ 0.23
HERPUD1-201ENST00000300302 TMEM189-UBE2V1I3L0A0 370 aa16.51■□□□□ 0.23
HERPUD1-201ENST00000300302 I3L4J1 428 aa16.51■□□□□ 0.23
HERPUD1-201ENST00000300302 FSCN2O14926 492 aa16.51■□□□□ 0.23
HERPUD1-201ENST00000300302 PAPSS1O43252 624 aaPredicted RBP16.51■□□□□ 0.23
HERPUD1-201ENST00000300302 RAD51CO43502 376 aa16.51■□□□□ 0.23
HERPUD1-201ENST00000300302 DDHD2O94830 711 aa16.51■□□□□ 0.23
HERPUD1-201ENST00000300302 CXCL10P02778 98 aa16.51■□□□□ 0.23
HERPUD1-201ENST00000300302 FAM200BP0CF97 657 aa16.51■□□□□ 0.23
HERPUD1-201ENST00000300302 PDGFRAP16234 1089 aa16.51■□□□□ 0.23
HERPUD1-201ENST00000300302 TYMPP19971 482 aa16.51■□□□□ 0.23
HERPUD1-201ENST00000300302 CHRNA3P32297 505 aa16.51■□□□□ 0.23
HERPUD1-201ENST00000300302 KIAA0319Q5VV43 1072 aa16.51■□□□□ 0.23
HERPUD1-201ENST00000300302 OVOS1Q6IE37 1185 aa16.51■□□□□ 0.23
HERPUD1-201ENST00000300302 COLGALT2Q8IYK4 626 aa16.51■□□□□ 0.23
HERPUD1-201ENST00000300302 MYCBPAPQ8TBZ2 947 aa16.51■□□□□ 0.23
HERPUD1-201ENST00000300302 SCLYQ96I15 445 aa16.51■□□□□ 0.23
HERPUD1-201ENST00000300302 RUNDC3BQ96NL0 473 aa16.51■□□□□ 0.23
HERPUD1-201ENST00000300302 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.51■□□□□ 0.23
HERPUD1-201ENST00000300302 TRAPPC3O43617 180 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 RRP9O43818 475 aaKnown RBP16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 PHF2O75151 1096 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 LRCH4O75427 683 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 ZMYND10O75800 440 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 LCP1P13796 627 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 OR1G1P47890 313 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 CCL23P55773 120 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 COPS2P61201 443 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 MRPS25P82663 173 aaKnown RBP16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 MAPRE1Q15691 268 aaKnown RBP16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 CCNI2Q6ZMN8 369 aaPredicted RBP16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 PIGZQ86VD9 579 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 RXFP2Q8WXD0 754 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 KCTD13Q8WZ19 329 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 B3GNT5Q9BYG0 378 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 PPP1R12CQ9BZL4 782 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 AMACRQ9UHK6 382 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 PCDHB8Q9UN66 801 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 NR2E1Q9Y466 385 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 MYBPHLA2RUH7 354 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 CLDN5O00501 218 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 KRT1P04264 644 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 TNFRSF8P28908 595 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 SDC4P31431 198 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 PCK1P35558 622 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 GUCY2DQ02846 1103 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 DHX34Q14147 1143 aaKnown RBP16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 CLEC20AQ6ZU45 233 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 PAQR9Q6ZVX9 377 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 SLC26A9Q7LBE3 791 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 ARCQ7LC44 396 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 MAGOHBQ96A72 148 aaKnown RBP16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 PCED1BQ96HM7 432 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 PAWRQ96IZ0 340 aaKnown RBP16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 NCAPGQ9BPX3 1015 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 KRT82Q9NSB4 513 aa16.5■□□□□ 0.23
HERPUD1-201ENST00000300302 TSC2P49815 1807 aa16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 DPYSL4O14531 572 aa16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 GRAP2O75791 330 aa16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 ITGB1P05556 798 aa16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 GLI1P08151 1106 aa16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 TCF4P15884 667 aa16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 DR1Q01658 176 aa16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 SLC25A11Q02978 314 aaKnown RBP16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 YWHAHQ04917 246 aaPredicted RBP16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 CYP1B1Q16678 543 aa16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 INTS6LQ5JSJ4 861 aaKnown RBP16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 EFHC1Q5JVL4 640 aa16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 FAM35AQ86V20 835 aa16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 PRELID2Q8N945 189 aa16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 SMARCD1Q96GM5 515 aa16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 PIWIL1Q96J94 861 aaKnown RBP16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 MRPL9Q9BYD2 267 aaKnown RBP16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 OSBPL8Q9BZF1 889 aa16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 MCOLN1Q9GZU1 580 aa16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 LRRC4Q9HBW1 653 aa16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 EPB41L5Q9HCM4 733 aa16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 GDF3Q9NR23 364 aa16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 HOMER3Q9NSC5 361 aa16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 ATP11BQ9Y2G3 1177 aa16.49■□□□□ 0.23
HERPUD1-201ENST00000300302 ATP8B1O43520 1251 aa16.48■□□□□ 0.23
HERPUD1-201ENST00000300302 AP1G2O75843 785 aa16.48■□□□□ 0.23
HERPUD1-201ENST00000300302 GABBR2O75899 941 aa16.48■□□□□ 0.23
HERPUD1-201ENST00000300302 RARAP10276 462 aa16.48■□□□□ 0.23
HERPUD1-201ENST00000300302 RALAP11233 206 aa16.48■□□□□ 0.23
HERPUD1-201ENST00000300302 CYP2C18P33260 490 aa16.48■□□□□ 0.23
HERPUD1-201ENST00000300302 FLT3P36888 993 aa16.48■□□□□ 0.23
HERPUD1-201ENST00000300302 TSPY1Q01534 308 aa16.48■□□□□ 0.23
HERPUD1-201ENST00000300302 CCDC142Q17RM4 750 aa16.48■□□□□ 0.23
HERPUD1-201ENST00000300302 BEND6Q5SZJ8 279 aaPredicted RBP16.48■□□□□ 0.23
HERPUD1-201ENST00000300302 FAM171BQ6P995 826 aa16.48■□□□□ 0.23
HERPUD1-201ENST00000300302 NPAS4Q8IUM7 802 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms