RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 PROCP04070 461 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 ADSSP30520 456 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 SLC18A1P54219 525 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 GDF10P55107 478 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 CIAPIN1Q6FI81 312 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 ADGRD1Q6QNK2 874 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 SESTD1Q86VW0 696 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 ABRAQ8N0Z2 381 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 SKA1Q96BD8 255 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 MXRA8Q9BRK3 442 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 KLHL4Q9C0H6 718 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 RAB6BQ9NRW1 208 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 SOX13Q9UN79 622 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 TCRBV7S3A2A0A539 114 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 E2F8A0AVK6 867 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 WDR64B1ANS9 1081 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 E5RJQ4 531 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 CFLARO15519 480 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 GRIN3BO60391 1043 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 DESP17661 470 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 GTF2H1P32780 548 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 RPL22P35268 128 aaKnown RBP11.9□□□□□ -0.5
TRUB1-201ENST00000298746 GCNT1Q02742 428 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 KRT72Q14CN4 511 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 DENND5BQ6ZUT9 1274 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 RELL1Q8IUW5 271 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 PPP4R1Q8TF05 950 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 CPT1BQ92523 772 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 APPL1Q9UKG1 709 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 TCRBV9S1A1TA0A576 114 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 LRRIQ4A6NIV6 560 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 TCP10L2B9ZVM9 353 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 FKBP6O75344 327 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 ZMPSTE24O75844 475 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 GTF2BQ00403 316 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 CNGA3Q16281 694 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 APOBEC3HQ6NTF7 200 aaKnown RBP11.9□□□□□ -0.5
TRUB1-201ENST00000298746 DHDDSQ86SQ9 333 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 LCA5Q86VQ0 697 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 LDHDQ86WU2 507 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 ZNF677Q86XU0 584 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 MAP7D3Q8IWC1 876 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 SPATA18Q8TC71 538 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 NAT14Q8WUY8 206 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 ZC3H7BQ9UGR2 993 aaKnown RBP11.9□□□□□ -0.5
TRUB1-201ENST00000298746 HEY1Q9Y5J3 304 aa11.9□□□□□ -0.5
TRUB1-201ENST00000298746 CLPTM1O96005 669 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 APRTP07741 180 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 SNRPAP09012 282 aaKnown RBP11.89□□□□□ -0.51
TRUB1-201ENST00000298746 SETSIPP0DME0 302 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 PEX2P28328 305 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 AQP4P55087 323 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 NOMO3P69849 1222 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 SCYL2Q6P3W7 929 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 C1orf228Q6PIY5 440 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 TRIM72Q6ZMU5 477 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 MON1BQ7L1V2 547 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 AMIGO3Q86WK7 504 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 GALNT4Q8N4A0 578 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 CNBD2Q96M20 576 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 RIT2Q99578 217 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 CYLDQ9NQC7 956 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 KCNK4Q9NYG8 393 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 IL1RAPL1Q9NZN1 696 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 LMCD1Q9NZU5 365 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.89□□□□□ -0.51
TRUB1-201ENST00000298746 PPEF1O14829 653 aaPredicted RBP11.89□□□□□ -0.51
TRUB1-201ENST00000298746 MAGEC1O60732 1142 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 RAG1P15918 1043 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 ADRA2BP18089 450 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 ACTR3P61158 418 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 NCOA4Q13772 614 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 PDK3Q15120 406 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 PRKD1Q15139 912 aaPredicted RBP11.89□□□□□ -0.51
TRUB1-201ENST00000298746 RALGPS1Q5JS13 557 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 TMEM35BQ8NCS4 154 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 FAM210AQ96ND0 272 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 SEPT9Q9UHD8 586 aaPredicted RBP11.89□□□□□ -0.51
TRUB1-201ENST00000298746 FAF1Q9UNN5 650 aaPredicted RBP11.89□□□□□ -0.51
TRUB1-201ENST00000298746 hCG_1818297A0A087WSY0 165 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 F8W8V4 182 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 ITGB5P18084 799 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 COPAP53621 1224 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 CUL2Q13617 745 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 CDO1Q16878 200 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 HSP90AA5PQ58FG0 334 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 ANO5Q75V66 913 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 UNC45BQ8IWX7 931 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 DEFB107AQ8IZN7 70 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 EMC1Q8N766 993 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 GSDMBQ8TAX9 411 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 PPP1R36Q96LQ0 422 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 AGBL1Q96MI9 1066 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 EBF4Q9BQW3 602 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 GRIP2Q9C0E4 1043 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 Q9H521 79 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 ZNF711Q9Y462 761 aa11.89□□□□□ -0.51
TRUB1-201ENST00000298746 KRT38O76015 456 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 CALB1P05937 261 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 VCLP18206 1134 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms