RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 HEXIM1O94992 359 aaKnown RBP16.34■□□□□ 0.21
LSM6-201ENST00000296581 SCNN1AP37088 669 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 MAGEA9P43362 315 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 SLC6A3Q01959 620 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 CYP1B1Q16678 543 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 PAQR9Q6ZVX9 377 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 POLNQ7Z5Q5 900 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 ADAT2Q7Z6V5 191 aaKnown RBP16.34■□□□□ 0.21
LSM6-201ENST00000296581 EGFL6Q8IUX8 553 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 ARFGAP1Q8N6T3 406 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 SEPT8Q92599 483 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 APBB2Q92870 758 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 PIWIL1Q96J94 861 aaKnown RBP16.34■□□□□ 0.21
LSM6-201ENST00000296581 SYT15Q9BQS2 421 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 DUSP16Q9BY84 665 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 CDH9Q9ULB4 789 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 C2CD4BA6NLJ0 364 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 PIK3R2O00459 728 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 XPO1O14980 1071 aaKnown RBP16.34■□□□□ 0.21
LSM6-201ENST00000296581 PAPSS1O43252 624 aaPredicted RBP16.34■□□□□ 0.21
LSM6-201ENST00000296581 PHF2O75151 1096 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 LRCH4O75427 683 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 SSR1P43307 286 aaKnown RBP16.34■□□□□ 0.21
LSM6-201ENST00000296581 ACADSBP45954 432 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 ZNF143P52747 638 aaPredicted RBP16.34■□□□□ 0.21
LSM6-201ENST00000296581 PLCB3Q01970 1234 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 CCDC91Q7Z6B0 441 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 CCDC26Q8TAB7 109 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 URGCPQ8TCY9 931 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 KHSRPQ92945 711 aaKnown RBP eCLIP16.34■□□□□ 0.21
LSM6-201ENST00000296581 KANSL3Q9P2N6 904 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 MTUS1Q9ULD2 1270 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 TIMM13Q9Y5L4 95 aaPredicted RBP16.34■□□□□ 0.21
LSM6-201ENST00000296581 TET1Q8NFU7 2136 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 SCN5AQ14524 2016 aa16.33■□□□□ 0.21
LSM6-201ENST00000296581 TCRBV7S2A1N4TA0A589 114 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 ATP8B1O43520 1251 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 B4GALT3O60512 393 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 BRCC3P46736 316 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 SLC25A11Q02978 314 aaKnown RBP16.33■□□□□ 0.2
LSM6-201ENST00000296581 CCDC142Q17RM4 750 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 MDH1BQ5I0G3 518 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 C1orf53Q5VUE5 145 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 TRNP1Q6NT89 227 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 MAATS1Q7Z4T9 603 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 IFT20Q8IY31 132 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 C12orf50Q8NA57 414 aaPredicted RBP16.33■□□□□ 0.2
LSM6-201ENST00000296581 RSPH1Q8WYR4 309 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 ZNF333Q96JL9 665 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 SUSD3Q96L08 255 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 TOX2Q96NM4 488 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 RTP3Q9BQQ7 232 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 AMACRQ9UHK6 382 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 DSEQ9UL01 958 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 TMEM189-UBE2V1I3L0A0 370 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 DPYSL4O14531 572 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 DDHD2O94830 711 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 MYBL2P10244 700 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 RARAP10276 462 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 GPD1P21695 349 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 PCSK1P29120 753 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 CHRNA3P32297 505 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 ATN1P54259 1190 aaPredicted RBP16.33■□□□□ 0.2
LSM6-201ENST00000296581 MAP9Q49MG5 647 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 PAN2Q504Q3 1202 aaKnown RBP16.33■□□□□ 0.2
LSM6-201ENST00000296581 ZNF280BQ86YH2 543 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 COLGALT2Q8IYK4 626 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 RCOR2Q8IZ40 523 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 MAIP1Q8WWC4 291 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 RBM41Q96IZ5 413 aaKnown RBP16.33■□□□□ 0.2
LSM6-201ENST00000296581 CNPY3Q9BT09 278 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 B3GNT5Q9BYG0 378 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 TBC1D13Q9NVG8 400 aa16.33■□□□□ 0.2
LSM6-201ENST00000296581 DDX56Q9NY93 547 aaKnown RBP16.33■□□□□ 0.2
LSM6-201ENST00000296581 ARHGEF37A1IGU5 675 aa16.32■□□□□ 0.2
LSM6-201ENST00000296581 I3L4J1 428 aa16.32■□□□□ 0.2
LSM6-201ENST00000296581 KIF1CO43896 1103 aaKnown RBP16.32■□□□□ 0.2
LSM6-201ENST00000296581 PARNO95453 639 aaKnown RBP16.32■□□□□ 0.2
LSM6-201ENST00000296581 CXCL10P02778 98 aa16.32■□□□□ 0.2
LSM6-201ENST00000296581 NPR3P17342 541 aa16.32■□□□□ 0.2
LSM6-201ENST00000296581 OAS2P29728 719 aaKnown RBP16.32■□□□□ 0.2
LSM6-201ENST00000296581 GUCY2DQ02846 1103 aa16.32■□□□□ 0.2
LSM6-201ENST00000296581 ATP13A4Q4VNC1 1196 aa16.32■□□□□ 0.2
LSM6-201ENST00000296581 TXNRD3NBQ6F5E7 133 aa16.32■□□□□ 0.2
LSM6-201ENST00000296581 METTL23Q86XA0 190 aa16.32■□□□□ 0.2
LSM6-201ENST00000296581 SCUBE3Q8IX30 993 aa16.32■□□□□ 0.2
LSM6-201ENST00000296581 RXFP2Q8WXD0 754 aa16.32■□□□□ 0.2
LSM6-201ENST00000296581 ACBD6Q9BR61 282 aa16.32■□□□□ 0.2
LSM6-201ENST00000296581 HERPUD2Q9BSE4 406 aa16.32■□□□□ 0.2
LSM6-201ENST00000296581 ASNSD1Q9NWL6 643 aa16.32■□□□□ 0.2
LSM6-201ENST00000296581 TTC3P53804 2025 aa16.32■□□□□ 0.2
LSM6-201ENST00000296581 DCDC2CA8MYV0 355 aa16.31■□□□□ 0.2
LSM6-201ENST00000296581 CLDN5O00501 218 aa16.31■□□□□ 0.2
LSM6-201ENST00000296581 ITGB1P05556 798 aa16.31■□□□□ 0.2
LSM6-201ENST00000296581 TYMPP19971 482 aa16.31■□□□□ 0.2
LSM6-201ENST00000296581 PCK1P35558 622 aa16.31■□□□□ 0.2
LSM6-201ENST00000296581 GJC1P36383 396 aa16.31■□□□□ 0.2
LSM6-201ENST00000296581 FLT3P36888 993 aa16.31■□□□□ 0.2
LSM6-201ENST00000296581 SLC8A3P57103 927 aa16.31■□□□□ 0.2
LSM6-201ENST00000296581 FAAP100Q0VG06 881 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms