RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 TNNC1P63316 161 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 FAM160A1Q05DH4 1040 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 USP4Q13107 963 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 SRSF5Q13243 272 aaKnown RBP10.17□□□□□ -0.78
HMHB1-201ENST00000289448 BIRC3Q13489 604 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 TRPC3Q13507 836 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 NCOA4Q13772 614 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 LRRC32Q14392 662 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 MTF1Q14872 753 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 DGKKQ5KSL6 1271 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 C1orf228Q6PIY5 440 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 PAQR9Q6ZVX9 377 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 TTC16Q8NEE8 873 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 GOLGA5Q8TBA6 731 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 SYAP1Q96A49 352 aaPredicted RBP10.17□□□□□ -0.78
HMHB1-201ENST00000289448 C8orf48Q96LL4 319 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 TTLL2Q9BWV7 592 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 FAM126AQ9BYI3 521 aaPredicted RBP10.17□□□□□ -0.78
HMHB1-201ENST00000289448 LINC00597Q9H2U6 94 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 VRTNQ9H8Y1 702 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 KIF9Q9HAQ2 790 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 GDPD2Q9HCC8 539 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 SMG5Q9UPR3 1016 aaKnown RBP10.17□□□□□ -0.78
HMHB1-201ENST00000289448 WNT6Q9Y6F9 365 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 GREB1Q4ZG55 1949 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 CHURC1-FNTBB4DL54 471 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 TRDMT1O14717 391 aaKnown RBP10.16□□□□□ -0.78
HMHB1-201ENST00000289448 TRIM66O15016 1216 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 HRO43593 1189 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 RHOBTB3O94955 611 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 PAPSS2O95340 614 aaPredicted RBP10.16□□□□□ -0.78
HMHB1-201ENST00000289448 MYL1P05976 194 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 CKMP06732 381 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 USP17L7P0C7H9 530 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 HDCP19113 662 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 FNTBP49356 437 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 GALK1P51570 392 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 NOP14P78316 857 aaKnown RBP10.16□□□□□ -0.78
HMHB1-201ENST00000289448 DPYDQ12882 1025 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 PDGFRLQ15198 375 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 LPAL2Q16609 132 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 ZNF699Q32M78 642 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 ZACNQ401N2 412 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 TMEM196Q5HYL7 178 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 SPOPLQ6IQ16 392 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 CC2D1AQ6P1N0 951 aaPredicted RBP10.16□□□□□ -0.78
HMHB1-201ENST00000289448 SCARA5Q6ZMJ2 495 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 DENND5BQ6ZUT9 1274 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 SV2AQ7L0J3 742 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 FSIP1Q8NA03 581 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 B3GALNT2Q8NCR0 500 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 SH3RF2Q8TEC5 729 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 OSCP1Q8WVF1 389 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 EZH1Q92800 747 aaPredicted RBP10.16□□□□□ -0.78
HMHB1-201ENST00000289448 RMDN1Q96DB5 314 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 CEP295NLQ96MC4 621 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 KCNK16Q96T55 309 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 HINFPQ9BQA5 517 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 RNF38Q9H0F5 515 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 DUS2Q9NX74 493 aaKnown RBP10.16□□□□□ -0.78
HMHB1-201ENST00000289448 HMGXB4Q9UGU5 601 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 ARHGAP26Q9UNA1 814 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 MAPK8IP1Q9UQF2 711 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 TRAF3IP3Q9Y228 551 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 ATG2BQ96BY7 2078 aa10.16□□□□□ -0.78
HMHB1-201ENST00000289448 PTPRDP23468 1912 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 ANAPC1Q9H1A4 1944 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 TPRP12270 2363 aaKnown RBP10.15□□□□□ -0.78
HMHB1-201ENST00000289448 A0A1W2PQ27 194 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 A0A1W2PQ64 194 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 A0A1W2PQD8 194 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 AKAP3O75969 853 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 EGFP01133 1207 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 TCF3P15923 654 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 TGM1P22735 817 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 ANXA13P27216 316 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 GJA4P35212 333 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 ID4P47928 161 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 AP3M2P53677 418 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 NRLP54845 237 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 TAF10Q12962 218 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 ORC1Q13415 861 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 KCNB1Q14721 858 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 EML3Q32P44 896 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 ZNF667Q5HYK9 610 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 CEP135Q66GS9 1140 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 HEATR6Q6AI08 1181 aaKnown RBP10.15□□□□□ -0.78
HMHB1-201ENST00000289448 KRBA2Q6ZNG9 492 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 SYNPOQ8N3V7 929 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 SCAMP5Q8TAC9 235 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 TMC2Q8TDI7 906 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 ELOVL4Q9GZR5 314 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 SCAND2PQ9GZW5 306 aaPredicted RBP10.15□□□□□ -0.78
HMHB1-201ENST00000289448 ECT2Q9H8V3 914 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 PARD6AQ9NPB6 346 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.15□□□□□ -0.78
HMHB1-201ENST00000289448 TRPM5Q9NZQ8 1165 aa10.15□□□□□ -0.78
HMHB1-201ENST00000289448 ZNF638Q14966 1978 aaKnown RBP10.15□□□□□ -0.78
HMHB1-201ENST00000289448 CNOT1A5YKK6 2376 aaKnown RBP10.15□□□□□ -0.79
HMHB1-201ENST00000289448 ANTXRLA6NF34 631 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms