RNA–Protein interactions for RNA: ENST00000275227.8

SLC18B1-201, Transcript of solute carrier family 18 member B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC18B1, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC18B1-201ENST00000275227 USP18Q9UMW8 372 aa17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 CEP350Q5VT06 3117 aa17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 DNALI1O14645 258 aaPredicted RBP17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 SPTLC1O15269 473 aa17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 IGHA2P01877 340 aa17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 ITGAVP06756 1048 aa17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 MMP13P45452 471 aa17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 ZNF157P51786 506 aaPredicted RBP17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 CDC42EP1Q00587 391 aa17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 GPS1Q13098 491 aa17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 IRF5Q13568 498 aa17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 CCDC38Q502W7 563 aa17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 MFSD5Q6N075 450 aa17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 C17orf99Q6UX52 265 aa17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 ZCCHC9Q8N567 271 aaKnown RBP17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 TTC39CQ8N584 583 aa17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 LRRC52Q8N7C0 313 aa17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 BEST2Q8NFU1 509 aa17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 TRIM6Q9C030 488 aaPredicted RBP17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 NMRK2Q9NPI5 230 aa17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 EFR3BQ9Y2G0 817 aa17.93■□□□□ 0.46
SLC18B1-201ENST00000275227 PDCD11Q14690 1871 aaKnown RBP17.92■□□□□ 0.46
SLC18B1-201ENST00000275227 AGTP01019 485 aa17.92■□□□□ 0.46
SLC18B1-201ENST00000275227 GDF10P55107 478 aa17.92■□□□□ 0.46
SLC18B1-201ENST00000275227 APBB1IPQ7Z5R6 666 aaPredicted RBP17.92■□□□□ 0.46
SLC18B1-201ENST00000275227 BBOF1Q8ND07 529 aa17.92■□□□□ 0.46
SLC18B1-201ENST00000275227 C9orf72Q96LT7 481 aa17.92■□□□□ 0.46
SLC18B1-201ENST00000275227 CNPY3Q9BT09 278 aa17.92■□□□□ 0.46
SLC18B1-201ENST00000275227 CTNNAL1Q9UBT7 734 aa17.92■□□□□ 0.46
SLC18B1-201ENST00000275227 SMIM28A0A1B0GU29 152 aa17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 TRAPPC3O43617 180 aa17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 FGFR1P11362 822 aa17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 PECAM1P16284 738 aaPredicted RBP17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 GPD1P21695 349 aa17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 PLCB3Q01970 1234 aa17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 SOX4Q06945 474 aaPredicted RBP17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 MMRN1Q13201 1228 aa17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 QPCTQ16769 361 aa17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 OLFML1Q6UWY5 402 aa17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 KBTBD7Q8WVZ9 684 aa17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 KHSRPQ92945 711 aaKnown RBP eCLIP17.91■□□□□ 0.461e-7■■■□□ 16.6
SLC18B1-201ENST00000275227 GOLGA2P5Q9HBQ8 144 aa17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 SRRM3A6NNA2 597 aaPredicted RBP17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 FOXO6A8MYZ6 492 aa17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 CPP00450 1065 aa17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 PDGFRAP16234 1089 aa17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 CPT1AP50416 773 aa17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 ZNF618Q5T7W0 954 aa17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 RELL1Q8IUW5 271 aa17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 KCTD6Q8NC69 237 aa17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 ARRDC4Q8NCT1 418 aa17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 RBM15Q96T37 977 aaKnown RBP eCLIP17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 ROPN1BQ9BZX4 212 aaPredicted RBP17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 ROPN1Q9HAT0 212 aaPredicted RBP17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 ASNSD1Q9NWL6 643 aa17.91■□□□□ 0.46
SLC18B1-201ENST00000275227 MYADML2A6NDP7 307 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 SGK1O00141 431 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 PIRO00625 290 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 RNF8O76064 485 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 IFNB1P01574 187 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 CTGFP29279 349 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 PCK1P35558 622 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 PCBP1Q15365 356 aaKnown RBP eCLIP17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 CDO1Q16878 200 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 CCDC14Q49A88 953 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 RNASEH2BQ5TBB1 312 aaKnown RBP17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 B4GALNT4Q76KP1 1039 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 OR6B3Q8NGW1 331 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 SLC35F5Q8WV83 523 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 CFAP57Q96MR6 1250 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 SELENOSQ9BQE4 189 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 SLC4A5Q9BY07 1137 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 B3GNT5Q9BYG0 378 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 CNOT10Q9H9A5 744 aaKnown RBP17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 PCDH9Q9HC56 1237 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 FAM107AO95990 144 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 CHN1P15882 459 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 PDE4CQ08493 712 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 FASTKD3Q14CZ7 662 aaKnown RBP17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 ACAP1Q15027 740 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 SESTD1Q86VW0 696 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 RFX6Q8HWS3 928 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 SCUBE3Q8IX30 993 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 CCHCR1Q8TD31 782 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 CALN1Q9BXU9 219 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 UBQLN1Q9UMX0 589 aaKnown RBP17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 CAPN7Q9Y6W3 813 aa17.9■□□□□ 0.46
SLC18B1-201ENST00000275227 MANSC4A6NHS7 340 aaPredicted RBP17.89■□□□□ 0.45
SLC18B1-201ENST00000275227 PAPSS1O43252 624 aaPredicted RBP17.89■□□□□ 0.45
SLC18B1-201ENST00000275227 LMO2P25791 158 aa17.89■□□□□ 0.45
SLC18B1-201ENST00000275227 AXLP30530 894 aa17.89■□□□□ 0.45
SLC18B1-201ENST00000275227 HOXC8P31273 242 aa17.89■□□□□ 0.45
SLC18B1-201ENST00000275227 MAGEA4P43358 317 aa17.89■□□□□ 0.45
SLC18B1-201ENST00000275227 GAD2Q05329 585 aa17.89■□□□□ 0.45
SLC18B1-201ENST00000275227 IFT88Q13099 833 aa17.89■□□□□ 0.45
SLC18B1-201ENST00000275227 STILQ15468 1287 aa17.89■□□□□ 0.45
SLC18B1-201ENST00000275227 FSCN1Q16658 493 aaKnown RBP17.89■□□□□ 0.45
SLC18B1-201ENST00000275227 XKR4Q5GH76 650 aa17.89■□□□□ 0.45
SLC18B1-201ENST00000275227 RNF187Q5TA31 235 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms