RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 SUSD2Q9UGT4 822 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 SNX5Q9Y5X3 404 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 TDP2O95551 362 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 RPN2P04844 631 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 H2AFZP0C0S5 128 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 USP17L7P0C7H9 530 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 PSMA3P25788 255 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 DUSP3P51452 185 aaPredicted RBP8.14□□□□□ -1.11
USP3-201ENST00000268049 NRLP54845 237 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 PPP2R2AP63151 447 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 CACNB1Q02641 598 aaPredicted RBP8.14□□□□□ -1.11
USP3-201ENST00000268049 EFHC1Q5JVL4 640 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 RARS2Q5T160 578 aaKnown RBP8.14□□□□□ -1.11
USP3-201ENST00000268049 DAB2IPQ5VWQ8 1189 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 NAA35Q5VZE5 725 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 H2AFVQ71UI9 128 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 DNAJC9Q8WXX5 260 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 OMA1Q96E52 524 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 CORO1BQ9BR76 489 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 MCOLN1Q9GZU1 580 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 ZNF148Q9UQR1 794 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 POTEMA6NI47 508 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 PGRMC1O00264 195 aaKnown RBP8.14□□□□□ -1.11
USP3-201ENST00000268049 MMP3P08254 477 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 INHBAP08476 426 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 SAT1P21673 171 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 MUTP22033 750 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 GUCA1AP43080 201 aaPredicted RBP8.14□□□□□ -1.11
USP3-201ENST00000268049 CAPZA2P47755 286 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 BEX3Q00994 111 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 SLC7A5Q01650 507 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 PRKCZQ05513 592 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 HIST2H2ACQ16777 129 aaPredicted RBP8.14□□□□□ -1.11
USP3-201ENST00000268049 HIST2H2AA3Q6FI13 130 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.14□□□□□ -1.11
USP3-201ENST00000268049 TTC13Q8NBP0 860 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 ATP8B4Q8TF62 1192 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 LRRC37BQ96QE4 947 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 EGFL8Q99944 293 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 EIF2AK1Q9BQI3 630 aaKnown RBP8.14□□□□□ -1.11
USP3-201ENST00000268049 ZMYND12Q9H0C1 365 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 COPS7BQ9H9Q2 264 aaPredicted RBP8.14□□□□□ -1.11
USP3-201ENST00000268049 UBE2TQ9NPD8 197 aaPredicted RBP8.14□□□□□ -1.11
USP3-201ENST00000268049 LRRC72A6NJI9 287 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 USP2O75604 605 aaPredicted RBP8.14□□□□□ -1.11
USP3-201ENST00000268049 LCP1P13796 627 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 SERPINB10P48595 397 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 CARSP49589 748 aaKnown RBP8.14□□□□□ -1.11
USP3-201ENST00000268049 TROAPQ12815 778 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 MED21Q13503 144 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 ART3Q13508 389 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 FLOT2Q14254 428 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 TBC1D25Q3MII6 688 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 CCDC144BQ3MJ40 725 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 OVOS1Q6IE37 1185 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 TMEM143Q96AN5 459 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 NT5C1AQ9BXI3 368 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 SLC40A1Q9NP59 571 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 PDP2Q9P2J9 529 aa8.14□□□□□ -1.11
USP3-201ENST00000268049 SYCE1LA8MT33 242 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 MAN2B1O00754 1011 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 EIF3HO15372 352 aaKnown RBP eCLIP8.13□□□□□ -1.11
USP3-201ENST00000268049 NDUFB5O43674 189 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 FBXO21O94952 628 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 EYA4O95677 639 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 SERPIND1P05546 499 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 PLCG1P19174 1290 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 PAX7P23759 505 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 LSP1P33241 339 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 PTGER2P43116 358 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 PRAMEP78395 509 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 MRPL28Q13084 256 aaKnown RBP8.13□□□□□ -1.11
USP3-201ENST00000268049 CRHR2Q13324 411 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 CDO1Q16878 200 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 TAF1BQ53T94 588 aaPredicted RBP8.13□□□□□ -1.11
USP3-201ENST00000268049 HLA-DQA1Q5Y7H0 255 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 C11orf57Q6ZUT1 292 aaPredicted RBP8.13□□□□□ -1.11
USP3-201ENST00000268049 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.13□□□□□ -1.11
USP3-201ENST00000268049 RASSF3Q86WH2 238 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 CDC26Q8NHZ8 85 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 ZNF296Q8WUU4 475 aaPredicted RBP8.13□□□□□ -1.11
USP3-201ENST00000268049 MAML1Q92585 1016 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 MAGEB10Q96LZ2 347 aaPredicted RBP8.13□□□□□ -1.11
USP3-201ENST00000268049 FMO2Q99518 471 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 CERS4Q9HA82 394 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 KLHL11Q9NVR0 708 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 SPATA6Q9NWH7 488 aaPredicted RBP8.13□□□□□ -1.11
USP3-201ENST00000268049 WDR35Q9P2L0 1181 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 HDAC6Q9UBN7 1215 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 TNFSF13BQ9Y275 285 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.13□□□□□ -1.11
USP3-201ENST00000268049 TRIM16O95361 564 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 ZNF286BP0CG31 522 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 RRM1P23921 792 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 SERPINB1P30740 379 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 RBL2Q08999 1139 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 USP39Q53GS9 565 aaKnown RBP8.13□□□□□ -1.11
USP3-201ENST00000268049 ATPAF2Q8N5M1 289 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 ING2Q9H160 280 aa8.13□□□□□ -1.11
USP3-201ENST00000268049 EPN3Q9H201 632 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms