RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 ACSF2Q96CM8 615 aaPredicted RBP12.15□□□□□ -0.46
SCAF11-201ENST00000266589 SLITRK1Q96PX8 696 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 SYT15Q9BQS2 421 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 MED10Q9BTT4 135 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 B3GNT5Q9BYG0 378 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 ZWILCHQ9H900 591 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 CRTAC1Q9NQ79 661 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 DDX56Q9NY93 547 aaKnown RBP12.15□□□□□ -0.46
SCAF11-201ENST00000266589 PCYOX1Q9UHG3 505 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 UTP11Q9Y3A2 253 aaKnown RBP12.15□□□□□ -0.46
SCAF11-201ENST00000266589 TANC1Q9C0D5 1861 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 BHMG1C9JSJ3 638 aaPredicted RBP12.15□□□□□ -0.46
SCAF11-201ENST00000266589 XPO1O14980 1071 aaKnown RBP12.15□□□□□ -0.46
SCAF11-201ENST00000266589 LCP1P13796 627 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 PDGFRAP16234 1089 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 BRCC3P46736 316 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 PLA2G4AP47712 749 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 CDR1P51861 262 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 SLC8A3P57103 927 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 FAM189BP81408 668 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 KLF1Q13351 362 aaPredicted RBP12.15□□□□□ -0.46
SCAF11-201ENST00000266589 TAF5Q15542 800 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 HADHQ16836 314 aaKnown RBP12.15□□□□□ -0.46
SCAF11-201ENST00000266589 SMTNL2Q2TAL5 461 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 CLLU1OSQ5K130 101 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 MFSD7Q6UXD7 560 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 CD300LGQ6UXG3 332 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 JAMLQ86YT9 394 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 ZDHHC17Q8IUH5 632 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 CLEC4CQ8WTT0 213 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 C1orf54Q8WWF1 131 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 DUSP16Q9BY84 665 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 RAB17Q9H0T7 212 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 CYLDQ9NQC7 956 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 ASNSD1Q9NWL6 643 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 LRRD1A4D1F6 860 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 FAM187AA6NFU0 413 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 PITPNM1O00562 1244 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 KRT7P08729 469 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 NPR3P17342 541 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 IL1R2P27930 398 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 COILP38432 576 aaPredicted RBP12.14□□□□□ -0.47
SCAF11-201ENST00000266589 PTGIRP43119 386 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 ACADSBP45954 432 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 RPL34P49207 117 aaKnown RBP12.14□□□□□ -0.47
SCAF11-201ENST00000266589 FNTAP49354 379 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 ATN1P54259 1190 aaPredicted RBP12.14□□□□□ -0.47
SCAF11-201ENST00000266589 CUL1Q13616 776 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 GPNMBQ14956 572 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 C15orf59Q2T9L4 293 aaPredicted RBP12.14□□□□□ -0.47
SCAF11-201ENST00000266589 EMBQ6PCB8 327 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 SPOCD1Q6ZMY3 1216 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 PAQR9Q6ZVX9 377 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 SND1Q7KZF4 910 aaKnown RBP eCLIP12.14□□□□□ -0.47
SCAF11-201ENST00000266589 DDX42Q86XP3 938 aaKnown RBP eCLIP12.14□□□□□ -0.47
SCAF11-201ENST00000266589 CCDC105Q8IYK2 499 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 DBF4BQ8NFT6 615 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 URGCPQ8TCY9 931 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 RAPGEF5Q92565 580 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 HSFY1Q96LI6 401 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 RUNDC3BQ96NL0 473 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 CNPY3Q9BT09 278 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 LRRC19Q9H756 370 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 FAM53CQ9NYF3 392 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 OGFRQ9NZT2 677 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 PCSK1NQ9UHG2 260 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 RASAL2Q9UJF2 1139 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 CDH9Q9ULB4 789 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 MYBPHLA2RUH7 354 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 DAPK3O43293 454 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 B4GALT3O60512 393 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 BEST1O76090 585 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 ITGB1P05556 798 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 KRT10P13645 584 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 PCSK1P29120 753 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 MIPP30301 263 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 KCNJ1P48048 391 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 COPS2P61201 443 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 PLCB3Q01970 1234 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 SNX1Q13596 522 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 HLTFQ14527 1009 aaKnown RBP eCLIP12.14□□□□□ -0.47
SCAF11-201ENST00000266589 CDO1Q16878 200 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 PLEKHG4Q58EX7 1191 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 NOMO2Q5JPE7 1267 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 KCNT1Q5JUK3 1230 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 SH3PXD2AQ5TCZ1 1133 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 KAZNQ674X7 775 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 CLEC20AQ6ZU45 233 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 PIGZQ86VD9 579 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 METTL23Q86XA0 190 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 ZNF280BQ86YH2 543 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 ATG4AQ8WYN0 398 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 RSPH1Q8WYR4 309 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 SEC14L1Q92503 715 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 KHSRPQ92945 711 aaKnown RBP eCLIP12.14□□□□□ -0.472e-6■■■□□ 18.4
SCAF11-201ENST00000266589 CAVIN3Q969G5 261 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 CFAP57Q96MR6 1250 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 TRIM31Q9BZY9 425 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 DPH5Q9H2P9 285 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 CHST7Q9NS84 486 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms