RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 SYT17Q9BSW7 474 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 CYP4F11Q9HBI6 524 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 SLC13A4Q9UKG4 626 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 ZNF197O14709 1029 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 ANP32DO95626 131 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 GLRA2P23416 452 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 SLC25A41Q8N5S1 370 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 STAMBPL1Q96FJ0 436 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 DCUN1D1Q96GG9 259 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 DDX43Q9NXZ2 648 aaKnown RBP16.03■□□□□ 0.16
TIMP3-201ENST00000266085 TSPAN16Q9UKR8 245 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 TRIM17Q9Y577 477 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 TMEM247A6NEH6 219 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 LSP1P33241 339 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 PPP3CAQ08209 521 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 LRRC6Q86X45 466 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 HMX1Q9NP08 348 aaPredicted RBP16.03■□□□□ 0.16
TIMP3-201ENST00000266085 ADA2Q9NZK5 511 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 CFAP73A6NFT4 308 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 CHUKO15111 745 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 PPP1R11O60927 126 aaPredicted RBP16.03■□□□□ 0.16
TIMP3-201ENST00000266085 ALDH2P05091 517 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 PDAP1Q13442 181 aaKnown RBP16.03■□□□□ 0.16
TIMP3-201ENST00000266085 COBLL1Q53SF7 1204 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 DDX53Q86TM3 631 aaKnown RBP16.03■□□□□ 0.16
TIMP3-201ENST00000266085 NLGN2Q8NFZ4 835 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 CCDC124Q96CT7 223 aaKnown RBP16.03■□□□□ 0.16
TIMP3-201ENST00000266085 SYT15Q9BQS2 421 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 NSMCE4AQ9NXX6 385 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 KRT4P19013 534 aa16.02■□□□□ 0.16
TIMP3-201ENST00000266085 HADHAP40939 763 aa16.02■□□□□ 0.16
TIMP3-201ENST00000266085 OTUD4Q01804 1114 aaKnown RBP16.02■□□□□ 0.16
TIMP3-201ENST00000266085 TBX2Q13207 712 aaPredicted RBP16.02■□□□□ 0.16
TIMP3-201ENST00000266085 TREML2Q5T2D2 321 aa16.02■□□□□ 0.16
TIMP3-201ENST00000266085 OVOS1Q6IE37 1185 aa16.02■□□□□ 0.16
TIMP3-201ENST00000266085 ATP6V0D2Q8N8Y2 350 aa16.02■□□□□ 0.16
TIMP3-201ENST00000266085 FBXO25Q8TCJ0 367 aa16.02■□□□□ 0.16
TIMP3-201ENST00000266085 EML4Q9HC35 981 aaKnown RBP16.02■□□□□ 0.16
TIMP3-201ENST00000266085 PCDHB8Q9UN66 801 aa16.02■□□□□ 0.16
TIMP3-201ENST00000266085 PHF20L1A8MW92 1017 aa16.02■□□□□ 0.16
TIMP3-201ENST00000266085 PMPCBO75439 489 aa16.02■□□□□ 0.16
TIMP3-201ENST00000266085 ANXA9O76027 345 aa16.02■□□□□ 0.16
TIMP3-201ENST00000266085 TMCC1O94876 653 aa16.02■□□□□ 0.16
TIMP3-201ENST00000266085 ESRRBO95718 433 aa16.02■□□□□ 0.16
TIMP3-201ENST00000266085 LRG1P02750 347 aa16.02■□□□□ 0.16
TIMP3-201ENST00000266085 SPATA31C1P0DKV0 1188 aa16.02■□□□□ 0.16
TIMP3-201ENST00000266085 THEMIS2Q5TEJ8 643 aa16.02■□□□□ 0.16
TIMP3-201ENST00000266085 CCDC33Q8N5R6 958 aa16.02■□□□□ 0.16
TIMP3-201ENST00000266085 THEGQ9P2T0 379 aa16.02■□□□□ 0.16
TIMP3-201ENST00000266085 DSEQ9UL01 958 aa16.02■□□□□ 0.16
TIMP3-201ENST00000266085 USP15Q9Y4E8 981 aaPredicted RBP16.02■□□□□ 0.16
TIMP3-201ENST00000266085 KNDC1Q76NI1 1749 aa16.02■□□□□ 0.15
TIMP3-201ENST00000266085 DDX3XO00571 662 aaKnown RBP eCLIP16.02■□□□□ 0.151e-30■■■■□ 22.1
TIMP3-201ENST00000266085 ZNF263O14978 683 aa16.02■□□□□ 0.15
TIMP3-201ENST00000266085 MEFVO15553 781 aaPredicted RBP16.02■□□□□ 0.15
TIMP3-201ENST00000266085 PLA2G6O60733 806 aa16.02■□□□□ 0.15
TIMP3-201ENST00000266085 KCNA2P16389 499 aa16.02■□□□□ 0.15
TIMP3-201ENST00000266085 BST2Q10589 180 aaKnown RBP16.02■□□□□ 0.15
TIMP3-201ENST00000266085 LBRQ14739 615 aaKnown RBP16.02■□□□□ 0.15
TIMP3-201ENST00000266085 C11orf63Q6NUN7 778 aa16.02■□□□□ 0.15
TIMP3-201ENST00000266085 MCOLN2Q8IZK6 566 aa16.02■□□□□ 0.15
TIMP3-201ENST00000266085 KIRREL3Q8IZU9 778 aa16.02■□□□□ 0.15
TIMP3-201ENST00000266085 ZNF473Q8WTR7 871 aaKnown RBP16.02■□□□□ 0.15
TIMP3-201ENST00000266085 YME1L1Q96TA2 773 aa16.02■□□□□ 0.15
TIMP3-201ENST00000266085 TASP1Q9H6P5 420 aa16.02■□□□□ 0.15
TIMP3-201ENST00000266085 NDE1Q9NXR1 346 aa16.02■□□□□ 0.15
TIMP3-201ENST00000266085 USP18Q9UMW8 372 aa16.02■□□□□ 0.15
TIMP3-201ENST00000266085 H7C4K7 107 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 PPFIA2O75334 1257 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 EEF1B2P24534 225 aaKnown RBP16.01■□□□□ 0.15
TIMP3-201ENST00000266085 SH3BP5LQ7L8J4 393 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 SLFN11Q7Z7L1 901 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 TMEM161BQ8NDZ6 487 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 KAT5Q92993 513 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 RMDN2Q96LZ7 410 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 ECT2Q9H8V3 914 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 LATS2Q9NRM7 1088 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 RNF19AQ9NV58 838 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 GRID1Q9ULK0 1009 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 SPATA31C2B4DYI2 1134 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 PGK1P00558 417 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 CKMP06732 381 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 EIF4BP23588 611 aaKnown RBP16.01■□□□□ 0.15
TIMP3-201ENST00000266085 FDFT1P37268 417 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 TKTL1P51854 596 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 GTF2BQ00403 316 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 MAPRE2Q15555 327 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 ZNF280DQ6N043 979 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 SERPINB12Q96P63 405 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 ZNF541Q9H0D2 1346 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 SLC15A5A6NIM6 579 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 RECQL4O94761 1208 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 SLC11A2P49281 568 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 TRADDQ15628 312 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 RGMBQ6NW40 437 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 LRRC55Q6ZSA7 311 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 GPR142Q7Z601 462 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 LINC00523Q86TU6 105 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 TTC30BQ8N4P2 665 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 PIP4K2CQ8TBX8 421 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms