RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 TTC7AQ9ULT0 858 aaPredicted RBP24.1■■□□□ 1.45
SMARCB1-201ENST00000263121 BEST1O76090 585 aa24.09■■□□□ 1.45
SMARCB1-201ENST00000263121 AMHP03971 560 aa24.09■■□□□ 1.45
SMARCB1-201ENST00000263121 SLC6A3Q01959 620 aa24.09■■□□□ 1.45
SMARCB1-201ENST00000263121 ERCC6LQ2NKX8 1250 aa24.09■■□□□ 1.45
SMARCB1-201ENST00000263121 SPATA4Q8NEY3 305 aa24.09■■□□□ 1.45
SMARCB1-201ENST00000263121 KCTD13Q8WZ19 329 aa24.09■■□□□ 1.45
SMARCB1-201ENST00000263121 UBXN4Q92575 508 aa24.09■■□□□ 1.45
SMARCB1-201ENST00000263121 TMEM209Q96SK2 561 aa24.09■■□□□ 1.45
SMARCB1-201ENST00000263121 SCNN1AP37088 669 aa24.08■■□□□ 1.45
SMARCB1-201ENST00000263121 TAS2R40P59535 323 aa24.08■■□□□ 1.45
SMARCB1-201ENST00000263121 WDR5P61964 334 aaKnown RBP24.08■■□□□ 1.45
SMARCB1-201ENST00000263121 TUBB4BP68371 445 aa24.08■■□□□ 1.45
SMARCB1-201ENST00000263121 TSPY1Q01534 308 aa24.08■■□□□ 1.45
SMARCB1-201ENST00000263121 DAB2IPQ5VWQ8 1189 aa24.08■■□□□ 1.45
SMARCB1-201ENST00000263121 LRRTM3Q86VH5 581 aa24.08■■□□□ 1.45
SMARCB1-201ENST00000263121 SCUBE3Q8IX30 993 aa24.08■■□□□ 1.45
SMARCB1-201ENST00000263121 EMC1Q8N766 993 aa24.08■■□□□ 1.45
SMARCB1-201ENST00000263121 NOA1Q8NC60 698 aaKnown RBP24.08■■□□□ 1.45
SMARCB1-201ENST00000263121 SMOQ99835 787 aa24.08■■□□□ 1.45
SMARCB1-201ENST00000263121 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.08■■□□□ 1.45
SMARCB1-201ENST00000263121 GPR62Q9BZJ7 368 aa24.08■■□□□ 1.45
SMARCB1-201ENST00000263121 TMLHEQ9NVH6 421 aa24.08■■□□□ 1.45
SMARCB1-201ENST00000263121 VWA8A3KMH1 1905 aa24.08■■□□□ 1.45
SMARCB1-201ENST00000263121 ALPK3Q96L96 1907 aa24.08■■□□□ 1.45
SMARCB1-201ENST00000263121 F8VP50 259 aa24.08■■□□□ 1.44
SMARCB1-201ENST00000263121 PGRMC1O00264 195 aaKnown RBP24.08■■□□□ 1.44
SMARCB1-201ENST00000263121 PSTPIP1O43586 416 aa24.08■■□□□ 1.44
SMARCB1-201ENST00000263121 AP1G2O75843 785 aa24.08■■□□□ 1.44
SMARCB1-201ENST00000263121 BCAR1P56945 870 aa24.08■■□□□ 1.44
SMARCB1-201ENST00000263121 RWDD2BP57060 319 aa24.08■■□□□ 1.44
SMARCB1-201ENST00000263121 DEFB103AP81534 67 aa24.08■■□□□ 1.44
SMARCB1-201ENST00000263121 MAPRE1Q15691 268 aaKnown RBP24.08■■□□□ 1.44
SMARCB1-201ENST00000263121 TEX35Q5T0J7 233 aa24.08■■□□□ 1.44
SMARCB1-201ENST00000263121 KHSRPQ92945 711 aaKnown RBP eCLIP24.08■■□□□ 1.44
SMARCB1-201ENST00000263121 ZNF689Q96CS4 500 aaPredicted RBP24.08■■□□□ 1.44
SMARCB1-201ENST00000263121 SMARCD1Q96GM5 515 aa24.08■■□□□ 1.44
SMARCB1-201ENST00000263121 RNPC3Q96LT9 517 aaKnown RBP24.08■■□□□ 1.44
SMARCB1-201ENST00000263121 CWH43Q9H720 699 aa24.08■■□□□ 1.44
SMARCB1-201ENST00000263121 RC3H2Q9HBD1 1191 aaKnown RBP24.08■■□□□ 1.44
SMARCB1-201ENST00000263121 IL23AQ9NPF7 189 aa24.08■■□□□ 1.44
SMARCB1-201ENST00000263121 USTQ9Y2C2 406 aa24.08■■□□□ 1.44
SMARCB1-201ENST00000263121 SF3B1O75533 1304 aaKnown RBP eCLIP24.08■■□□□ 1.44
SMARCB1-201ENST00000263121 NLRC5Q86WI3 1866 aa24.07■■□□□ 1.44
SMARCB1-201ENST00000263121 DYNC1I1O14576 645 aa24.07■■□□□ 1.44
SMARCB1-201ENST00000263121 BAIAP3O94812 1187 aa24.07■■□□□ 1.44
SMARCB1-201ENST00000263121 ACRP10323 421 aa24.07■■□□□ 1.44
SMARCB1-201ENST00000263121 FGFR3P22607 806 aa24.07■■□□□ 1.44
SMARCB1-201ENST00000263121 PSMA2P25787 234 aa24.07■■□□□ 1.44
SMARCB1-201ENST00000263121 MAP3K7CLP57077 242 aa24.07■■□□□ 1.44
SMARCB1-201ENST00000263121 MRPL58Q14197 206 aaKnown RBP24.07■■□□□ 1.44
SMARCB1-201ENST00000263121 VARS2Q5ST30 1063 aaKnown RBP24.07■■□□□ 1.44
SMARCB1-201ENST00000263121 FUT10Q6P4F1 479 aa24.07■■□□□ 1.44
SMARCB1-201ENST00000263121 RHOT1Q8IXI2 618 aa24.07■■□□□ 1.44
SMARCB1-201ENST00000263121 ZMIZ2Q8NF64 920 aa24.07■■□□□ 1.44
SMARCB1-201ENST00000263121 CSNK1G1Q9HCP0 422 aa24.07■■□□□ 1.44
SMARCB1-201ENST00000263121 TMEM30AQ9NV96 361 aa24.07■■□□□ 1.44
SMARCB1-201ENST00000263121 C2CD4BA6NLJ0 364 aa24.06■■□□□ 1.44
SMARCB1-201ENST00000263121 LCP1P13796 627 aa24.06■■□□□ 1.44
SMARCB1-201ENST00000263121 PBX3P40426 434 aa24.06■■□□□ 1.44
SMARCB1-201ENST00000263121 CDR1P51861 262 aa24.06■■□□□ 1.44
SMARCB1-201ENST00000263121 CACNA2D1P54289 1103 aa24.06■■□□□ 1.44
SMARCB1-201ENST00000263121 C2orf54Q08AI8 447 aa24.06■■□□□ 1.44
SMARCB1-201ENST00000263121 ELAVL2Q12926 359 aaKnown RBP24.06■■□□□ 1.44
SMARCB1-201ENST00000263121 ZNF211Q13398 564 aaPredicted RBP24.06■■□□□ 1.44
SMARCB1-201ENST00000263121 ELF2Q15723 593 aa24.06■■□□□ 1.44
SMARCB1-201ENST00000263121 FAM171A1Q5VUB5 890 aa24.06■■□□□ 1.44
SMARCB1-201ENST00000263121 TRNP1Q6NT89 227 aa24.06■■□□□ 1.44
SMARCB1-201ENST00000263121 CC2D1AQ6P1N0 951 aaPredicted RBP24.06■■□□□ 1.44
SMARCB1-201ENST00000263121 TMEM173Q86WV6 379 aaPredicted RBP24.06■■□□□ 1.44
SMARCB1-201ENST00000263121 BCL7CQ8WUZ0 217 aaPredicted RBP24.06■■□□□ 1.44
SMARCB1-201ENST00000263121 UBXN6Q9BZV1 441 aa24.06■■□□□ 1.44
SMARCB1-201ENST00000263121 ZCWPW1Q9H0M4 648 aa24.06■■□□□ 1.44
SMARCB1-201ENST00000263121 PCDH10Q9P2E7 1040 aa24.06■■□□□ 1.44
SMARCB1-201ENST00000263121 PTPRDP23468 1912 aa24.06■■□□□ 1.44
SMARCB1-201ENST00000263121 MKI67P46013 3256 aaKnown RBP24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 NT5C1B-RDH14C9J2C7 533 aa24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 PYGMP11217 842 aa24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 ZNF143P52747 638 aaPredicted RBP24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 RNASE9P60153 205 aaKnown RBP24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 SLC26A9Q7LBE3 791 aa24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 CLEC4CQ8WTT0 213 aa24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 EFEMP2O95967 443 aa24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 GPD1P21695 349 aa24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 FLT3P36888 993 aa24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 ADCY1Q08828 1119 aa24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 ADIGQ0VDE8 80 aa24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 ACAP1Q15027 740 aa24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 TAF5Q15542 800 aa24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 LRRC38Q5VT99 294 aa24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 ARCQ7LC44 396 aa24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 MMGT1Q8N4V1 131 aa24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 ARFGAP1Q8N6T3 406 aa24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 RHOBTB2Q9BYZ6 727 aa24.05■■□□□ 1.44
SMARCB1-201ENST00000263121 HHLA1C9JL84 531 aa24.04■■□□□ 1.44
SMARCB1-201ENST00000263121 DPYSL4O14531 572 aa24.04■■□□□ 1.44
SMARCB1-201ENST00000263121 TCF4P15884 667 aa24.04■■□□□ 1.44
SMARCB1-201ENST00000263121 RAB41Q5JT25 222 aa24.04■■□□□ 1.44
SMARCB1-201ENST00000263121 AADACL2Q6P093 401 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms