RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 DUX4L5P0CJ88 424 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 DUX4L6P0CJ89 424 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 DUX4L7P0CJ90 424 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 CLK2P49760 499 aaKnown RBP15.42■□□□□ 0.06
CCDC6-201ENST00000263102 PIGHQ14442 188 aaPredicted RBP15.42■□□□□ 0.06
CCDC6-201ENST00000263102 NBPF9Q3BBW0 867 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 MCOLN3Q8TDD5 553 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 MTERF3Q96E29 417 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 STAMBPL1Q96FJ0 436 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 TSC22D3Q99576 134 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 KLF6Q99612 283 aaPredicted RBP15.42■□□□□ 0.06
CCDC6-201ENST00000263102 SMARCAL1Q9NZC9 954 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 DUX4Q9UBX2 424 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 OR6A2O95222 327 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 CLTBP09497 229 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 PGM1P36871 562 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 EPHA10Q5JZY3 1008 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 RBM23Q86U06 439 aaKnown RBP15.42■□□□□ 0.06
CCDC6-201ENST00000263102 C4orf33Q8N1A6 199 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 TIPINQ9BVW5 301 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 SLC9A8Q9Y2E8 581 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 PTK7Q13308 1070 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 KYNUQ16719 465 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 FAXCQ5TGI0 409 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 TPGS1Q6ZTW0 290 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 CYP4Z1Q86W10 505 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 CENPLQ8N0S6 344 aaPredicted RBP15.42■□□□□ 0.06
CCDC6-201ENST00000263102 FAM71DQ8N9W8 422 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 PCYOX1LQ8NBM8 494 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 FAM151AQ8WW52 585 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 CRAMP1Q96RY5 1269 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 OSBPL9Q96SU4 736 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 PRMT1Q99873 361 aaKnown RBP15.42■□□□□ 0.06
CCDC6-201ENST00000263102 UBXN6Q9BZV1 441 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 PHACTR1Q9C0D0 580 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 EPC1Q9H2F5 836 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 STAP2Q9UGK3 403 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 PDHXO00330 501 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 CHGBP05060 677 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 EIF2S1P05198 315 aaKnown RBP15.42■□□□□ 0.06
CCDC6-201ENST00000263102 ZNF200P98182 395 aaPredicted RBP15.42■□□□□ 0.06
CCDC6-201ENST00000263102 SH3BP5LQ7L8J4 393 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 COLGALT2Q8IYK4 626 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 TMCC3Q9ULS5 477 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 RUVBL2Q9Y230 463 aaKnown RBP15.42■□□□□ 0.06
CCDC6-201ENST00000263102 SAMD9Q5K651 1589 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 SMIM22K7EJ46 135 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 CLUP10909 449 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 RPS12P25398 132 aaKnown RBP15.42■□□□□ 0.06
CCDC6-201ENST00000263102 CLK1P49759 484 aaKnown RBP15.42■□□□□ 0.06
CCDC6-201ENST00000263102 GEMP55040 296 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 XRCC4Q13426 336 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 CNGA3Q16281 694 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 SCARA3Q6AZY7 606 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 ZNF544Q6NX49 715 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 GMCL1Q96IK5 515 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.42■□□□□ 0.06
CCDC6-201ENST00000263102 NOP53Q9NZM5 478 aaKnown RBP15.42■□□□□ 0.06
CCDC6-201ENST00000263102 ADAM21Q9UKJ8 722 aa15.42■□□□□ 0.06
CCDC6-201ENST00000263102 EXTL3O43909 919 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 THP07101 528 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 FAM171A1Q5VUB5 890 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 MARK2Q7KZI7 788 aaKnown RBP15.41■□□□□ 0.06
CCDC6-201ENST00000263102 DSELQ8IZU8 1212 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 RFFLQ8WZ73 363 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 S100A13Q99584 98 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 KDM5CP41229 1560 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 SH3BGRLO75368 114 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 ATP5HO75947 161 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 PYGMP11217 842 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 VEGFAP15692 232 aaPredicted RBP15.41■□□□□ 0.06
CCDC6-201ENST00000263102 FRMD5Q7Z6J6 570 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 ATL2Q8NHH9 583 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 SLC35G2Q8TBE7 412 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 TARS2Q9BW92 718 aaKnown RBP15.41■□□□□ 0.06
CCDC6-201ENST00000263102 C16orf96A6NNT2 1141 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 HNRNPRO43390 633 aaKnown RBP15.41■□□□□ 0.06
CCDC6-201ENST00000263102 ANXA9O76027 345 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 KLHL18O94889 574 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 CTNNB1P35222 781 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 PIK3R5Q8WYR1 880 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 SIK3Q9Y2K2 1263 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 GOLGA8TH3BQL2 631 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 NFIBO00712 420 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 PARNO95453 639 aaKnown RBP15.41■□□□□ 0.06
CCDC6-201ENST00000263102 JAK1P23458 1154 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 CYP24A1Q07973 514 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 ACTN3Q08043 901 aaPredicted RBP15.41■□□□□ 0.06
CCDC6-201ENST00000263102 PTGISQ16647 500 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 LONRF1Q17RB8 773 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 SLC25A24Q6NUK1 477 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 FAM124AQ86V42 546 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 NEDD1Q8NHV4 660 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 DTX3LQ8TDB6 740 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 MXRA8Q9BRK3 442 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 RMND5AQ9H871 391 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 ETNK1Q9HBU6 452 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 NT5MQ9NPB1 228 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 GPSM3Q9Y4H4 160 aa15.41■□□□□ 0.06
CCDC6-201ENST00000263102 ROBO2Q9HCK4 1378 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms