RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 VPS51Q9UID3 782 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 LNPEPQ9UIQ6 1025 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 CLCA2Q9UQC9 943 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 RBAK-RBAKDNI3L0D1 243 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 HALP42357 657 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 MTHFRP42898 656 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 FXR1P51114 621 aaKnown RBP eCLIP13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 MCL1Q07820 350 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 CACNB2Q08289 660 aaPredicted RBP13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 MAGEC3Q8TD91 643 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 HEXDCQ8WVB3 486 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 CNPY3Q9BT09 278 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 FAM49BQ9NUQ9 324 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 NDE1Q9NXR1 346 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 SELENONQ9NZV5 590 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 PCDHGB4Q9UN71 923 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 A0A087WUV0 522 aaPredicted RBP13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 UCHL3P15374 230 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 ELNP15502 786 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 TYMPP19971 482 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 ACLYP53396 1101 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 CEP85LQ5SZL2 805 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 MRNIPQ6NTE8 343 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 BRI3BPQ8WY22 251 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 NIFKQ9BYG3 293 aaKnown RBP13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 DPH5Q9H2P9 285 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 PCSK1NQ9UHG2 260 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 TRIM33Q9UPN9 1127 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 COL16A1Q07092 1604 aaPredicted RBP13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 LTBP4Q8N2S1 1624 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 CCR3P51677 355 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 MYL6P60660 151 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 GRB14Q14449 540 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 ZNF655Q8N720 491 aaPredicted RBP13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 PABPC5Q96DU9 382 aaKnown RBP13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 VAT1Q99536 393 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 PKD2L2Q9NZM6 624 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 ZNF536O15090 1300 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 EXOC1LA0A1B0GW35 172 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 PRKAA1Q13131 559 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 SLC18A3Q16572 532 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 TMA16Q96EY4 203 aaKnown RBP13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 FAM105AQ9NUU6 356 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 ORC6Q9Y5N6 252 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 RAD54BQ9Y620 910 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 IFRD1O00458 451 aaPredicted RBP13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 CDR2Q01850 454 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 OR6P1Q8NGX9 317 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.98□□□□□ -0.175e-8■■■□□ 19.2
PRPF38A-201ENST00000257181 SMYD2Q9NRG4 433 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 TMEM161AQ9NX61 479 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 STK38LQ9Y2H1 464 aa13.98□□□□□ -0.17
PRPF38A-201ENST00000257181 NPHP3-ACAD11A0A0J9YXS1 232 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 PPFIA2O75334 1257 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 PSMD10O75832 226 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 SNHG28P0DPA3 235 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 MAPRE2Q15555 327 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 PTRHD1Q6GMV3 140 aaKnown RBP13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 PTPN22Q9Y2R2 807 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 DARSP14868 501 aaKnown RBP13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 PTPN2P17706 415 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 SARSP49591 514 aaKnown RBP13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 C1QBPQ07021 282 aaKnown RBP13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 EFEMP1Q12805 493 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 NAA25Q14CX7 972 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 DBN1Q16643 649 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 TFB1MQ8WVM0 346 aaKnown RBP13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 SENP8Q96LD8 212 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 MTMR12Q9C0I1 747 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 KCNMB3Q9NPA1 279 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 GSTA4O15217 222 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 MAPK9P45984 424 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 RGS7P49802 495 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 PDAP1Q13442 181 aaKnown RBP13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 NAB2Q15742 525 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 FSCBQ5H9T9 825 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 A0A088AWK7 358 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 ZNF263O14978 683 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 RECQL4O94761 1208 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 ZNF10P21506 573 aaPredicted RBP13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 ALS2CLQ60I27 953 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 ZFPM1Q8IX07 1006 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 RABEP2Q9H5N1 569 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 TRAF3IP3Q9Y228 551 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 RGPD1P0DJD0 1748 aa13.97□□□□□ -0.17
PRPF38A-201ENST00000257181 HEATR9A2RTY3 570 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 MTA2O94776 668 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 TKTL1P51854 596 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 PUS10Q3MIT2 529 aaKnown RBP13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 CIPCQ9C0C6 399 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 POLMQ9NP87 494 aaPredicted RBP13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 KBTBD4Q9NVX7 518 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 PCDHB9Q9Y5E1 797 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 O00370 1275 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 ITGB6P18564 788 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 LYPLAL1Q5VWZ2 237 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 MCUQ8NE86 351 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 NECTIN4Q96NY8 510 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 ERGIC2Q96RQ1 377 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 FMO2Q99518 471 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms