RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.11□□□□□ -0.15
NUP85-201ENST00000245544 DDX43Q9NXZ2 648 aaKnown RBP14.11□□□□□ -0.15
NUP85-201ENST00000245544 UTP11Q9Y3A2 253 aaKnown RBP14.11□□□□□ -0.15
NUP85-201ENST00000245544 C3orf70A6NLC5 250 aaPredicted RBP14.11□□□□□ -0.15
NUP85-201ENST00000245544 KBTBD13C9JR72 458 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 ITGB1P05556 798 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 LCP1P13796 627 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 PDGFRAP16234 1089 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 MIPP30301 263 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 BRCC3P46736 316 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 PRMT2P55345 433 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 BST2Q10589 180 aaKnown RBP14.11□□□□□ -0.15
NUP85-201ENST00000245544 DHX34Q14147 1143 aaKnown RBP14.11□□□□□ -0.15
NUP85-201ENST00000245544 GPNMBQ14956 572 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 ARHGEF6Q15052 776 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 PPP2R5EQ16537 467 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 CDO1Q16878 200 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 MDH1BQ5I0G3 518 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 DSTYKQ6XUX3 929 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 CCDC105Q8IYK2 499 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 RCOR2Q8IZ40 523 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 CAVIN3Q969G5 261 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 TNIP3Q96KP6 325 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 CFAP57Q96MR6 1250 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 PEBP4Q96S96 227 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 DCLK3Q9C098 648 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 SNX24Q9Y343 169 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 SQORQ9Y6N5 450 aa14.11□□□□□ -0.15
NUP85-201ENST00000245544 TET1Q8NFU7 2136 aa14.1□□□□□ -0.15
NUP85-201ENST00000245544 LRRD1A4D1F6 860 aa14.1□□□□□ -0.15
NUP85-201ENST00000245544 C9IYK1 514 aa14.1□□□□□ -0.15
NUP85-201ENST00000245544 CAND2O75155 1236 aa14.1□□□□□ -0.15
NUP85-201ENST00000245544 B3GAT3O94766 335 aa14.1□□□□□ -0.15
NUP85-201ENST00000245544 CD48P09326 243 aa14.1□□□□□ -0.15
NUP85-201ENST00000245544 SETSIPP0DME0 302 aa14.1□□□□□ -0.15
NUP85-201ENST00000245544 TFE3P19532 575 aaPredicted RBP14.1□□□□□ -0.15
NUP85-201ENST00000245544 GPD1P21695 349 aa14.1□□□□□ -0.15
NUP85-201ENST00000245544 RPL9P32969 192 aaKnown RBP14.1□□□□□ -0.15
NUP85-201ENST00000245544 CDK7P50613 346 aa14.1□□□□□ -0.15
NUP85-201ENST00000245544 ZNF143P52747 638 aaPredicted RBP14.1□□□□□ -0.15
NUP85-201ENST00000245544 BCAT1P54687 386 aa14.1□□□□□ -0.15
NUP85-201ENST00000245544 SLC6A3Q01959 620 aa14.1□□□□□ -0.15
NUP85-201ENST00000245544 CCDC14Q49A88 953 aa14.1□□□□□ -0.15
NUP85-201ENST00000245544 SPOCD1Q6ZMY3 1216 aa14.1□□□□□ -0.15
NUP85-201ENST00000245544 STK32AQ8WU08 396 aa14.1□□□□□ -0.15
NUP85-201ENST00000245544 NDRG1Q92597 394 aaKnown RBP14.1□□□□□ -0.15
NUP85-201ENST00000245544 DEFB118Q96PH6 123 aa14.1□□□□□ -0.15
NUP85-201ENST00000245544 RGS18Q9NS28 235 aa14.1□□□□□ -0.15
NUP85-201ENST00000245544 LCMT1Q9UIC8 334 aa14.1□□□□□ -0.15
NUP85-201ENST00000245544 MYBPHLA2RUH7 354 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 FAM187AA6NFU0 413 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 AARSP49588 968 aaKnown RBP eCLIP14.09□□□□□ -0.15
NUP85-201ENST00000245544 CUL1Q13616 776 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 CYP4V2Q6ZWL3 525 aaPredicted RBP14.09□□□□□ -0.15
NUP85-201ENST00000245544 RIN2Q8WYP3 895 aaPredicted RBP14.09□□□□□ -0.15
NUP85-201ENST00000245544 PGBD4Q96DM1 585 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 RBM41Q96IZ5 413 aaKnown RBP14.09□□□□□ -0.15
NUP85-201ENST00000245544 HNRNPABQ99729 332 aaKnown RBP14.09□□□□□ -0.15
NUP85-201ENST00000245544 ADAM33Q9BZ11 813 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 TMEM30AQ9NV96 361 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 AGPSO00116 658 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 NBNO60934 754 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 CDKN2BP42772 138 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 RPL21P46778 160 aaKnown RBP14.09□□□□□ -0.15
NUP85-201ENST00000245544 FNTAP49354 379 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 ATP11AP98196 1134 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 GRIK3Q13003 919 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 CLLU1OSQ5K130 101 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 PIGZQ86VD9 579 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 ZNF280BQ86YH2 543 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 FAM126BQ8IXS8 530 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 RTP3Q9BQQ7 232 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 CNPY3Q9BT09 278 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 VIPAS39Q9H9C1 493 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 USP18Q9UMW8 372 aa14.09□□□□□ -0.15
NUP85-201ENST00000245544 hCG_1818297A0A087WSY0 165 aa14.08□□□□□ -0.16
NUP85-201ENST00000245544 DNM1LO00429 736 aa14.08□□□□□ -0.16
NUP85-201ENST00000245544 DDHD2O94830 711 aa14.08□□□□□ -0.16
NUP85-201ENST00000245544 TRUB2O95900 331 aaKnown RBP14.08□□□□□ -0.16
NUP85-201ENST00000245544 RPL34P49207 117 aaKnown RBP14.08□□□□□ -0.16
NUP85-201ENST00000245544 CACNA2D1P54289 1103 aa14.08□□□□□ -0.16
NUP85-201ENST00000245544 TUSC3Q13454 348 aa14.08□□□□□ -0.16
NUP85-201ENST00000245544 TRIP13Q15645 432 aaPredicted RBP14.08□□□□□ -0.16
NUP85-201ENST00000245544 SLC24A5Q71RS6 500 aa14.08□□□□□ -0.16
NUP85-201ENST00000245544 LRRC8DQ7L1W4 858 aa14.08□□□□□ -0.16
NUP85-201ENST00000245544 POLNQ7Z5Q5 900 aa14.08□□□□□ -0.16
NUP85-201ENST00000245544 SYT15Q9BQS2 421 aa14.08□□□□□ -0.16
NUP85-201ENST00000245544 DUSP16Q9BY84 665 aa14.08□□□□□ -0.16
NUP85-201ENST00000245544 RAB17Q9H0T7 212 aa14.08□□□□□ -0.16
NUP85-201ENST00000245544 PAK6Q9NQU5 681 aaPredicted RBP14.08□□□□□ -0.16
NUP85-201ENST00000245544 ASNSD1Q9NWL6 643 aa14.08□□□□□ -0.16
NUP85-201ENST00000245544 DDX56Q9NY93 547 aaKnown RBP14.08□□□□□ -0.16
NUP85-201ENST00000245544 GRHL1Q9NZI5 618 aa14.08□□□□□ -0.16
NUP85-201ENST00000245544 RNF8O76064 485 aa14.08□□□□□ -0.16
NUP85-201ENST00000245544 SELPP16109 830 aa14.08□□□□□ -0.16
NUP85-201ENST00000245544 KDELR1P24390 212 aa14.08□□□□□ -0.16
NUP85-201ENST00000245544 OAS2P29728 719 aaKnown RBP14.08□□□□□ -0.16
NUP85-201ENST00000245544 NDUFV1P49821 464 aa14.08□□□□□ -0.16
NUP85-201ENST00000245544 FAM193AP78312 1265 aa14.08□□□□□ -0.16
NUP85-201ENST00000245544 NNTQ13423 1086 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms