RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 TMCO1Q9UM00 188 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 IGSF9BQ9UPX0 1349 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 TIAM2Q8IVF5 1701 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 CES2O00748 559 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 ASAP2O43150 1006 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 PRKCIP41743 596 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 NPTX2P47972 431 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 EFNA5P52803 228 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 HDAC4P56524 1084 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 TAP1Q03518 808 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 CBWD6Q4V339 395 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 CBWD3Q5JTY5 395 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 CBWD5Q5RIA9 395 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 SV2AQ7L0J3 742 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 RIBC1Q8N443 379 aaPredicted RBP12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 GMCL1P1Q8NEA9 526 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 ZBED3Q96IU2 234 aaPredicted RBP12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 KLF6Q99612 283 aaPredicted RBP12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 CDC42EP4Q9H3Q1 356 aaKnown RBP12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 KCNMB3Q9NPA1 279 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 CYP26B1Q9NR63 512 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 PGM3O95394 542 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 AP3M2P53677 418 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 VCPP55072 806 aaKnown RBP12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 OASLQ15646 514 aaKnown RBP12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 C3orf62Q6ZUJ4 267 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 DHX38Q92620 1227 aaKnown RBP12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 TSSK1BQ9BXA7 367 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 FAM49AQ9H0Q0 323 aaPredicted RBP12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 SLC5A4Q9NY91 659 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 APPL1Q9UKG1 709 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 LOC100653049A0A140TA62 436 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 HNRNPCL2B2RXH8 293 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 KRT34O76011 436 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 ICAM1P05362 532 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 WEE2P0C1S8 567 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 ROR1Q01973 937 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 C1orf228Q6PIY5 440 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 CATSPER1Q8NEC5 780 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 FEZF2Q8TBJ5 459 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 ARHGEF26Q96DR7 871 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 ZNF184Q99676 751 aaPredicted RBP12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 FOXP3Q9BZS1 431 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 C2orf40Q9H1Z8 148 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 HEY2Q9UBP5 337 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 COMMD3-BMI1R4GMX3 469 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 MYH1P12882 1939 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 O00370 1275 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 NFIBO00712 420 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 MAFGO15525 162 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 CST8O60676 142 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 ENTPD5O75356 428 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 RGS2P41220 211 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 HUNKP57058 714 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 MPP3Q13368 585 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 XRCC4Q13426 336 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 EMC2Q15006 297 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 TAF12Q16514 161 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 ECM1Q16610 540 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 ZNF554Q86TJ5 538 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 ZNF677Q86XU0 584 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 DDI1Q8WTU0 396 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 PPP2R3CQ969Q6 453 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 OTUD5Q96G74 571 aa12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 L3MBTL3Q96JM7 780 aaPredicted RBP12.63□□□□□ -0.39
TSPAN9-201ENST00000011898 CCDC189A1A4V9 331 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 MEIS2O14770 477 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 RARRES1P49788 294 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 ITKQ08881 620 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 NFX1Q12986 1120 aaKnown RBP12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 MYBPC2Q14324 1141 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 PIGHQ14442 188 aaPredicted RBP12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 ATG4CQ96DT6 458 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 INPP4AQ96PE3 977 aaPredicted RBP12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 SHCBP1LQ9BZQ2 653 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 GANQ9H2C0 597 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 TEKT2Q9UIF3 430 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 GGA2Q9UJY4 613 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 PHTF1Q9UMS5 762 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 DOLKQ9UPQ8 538 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 RBMX2Q9Y388 322 aaKnown RBP12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 LAMA4Q16363 1823 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 PYGBP11216 843 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 PYGMP11217 842 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 GTF2H1P32780 548 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 CAP2P40123 477 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 CCNA1P78396 465 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 CENPCQ03188 943 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 ITGB3BPQ13352 177 aaPredicted RBP12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 SMTNL2Q2TAL5 461 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 Q3C1V9 767 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 LPCAT2Q7L5N7 544 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 CATSPER4Q7RTX7 472 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 CALML6Q8TD86 181 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 C17orf75Q9HAS0 396 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 TOPORSQ9NS56 1045 aaPredicted RBP12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 PRKAG2Q9UGJ0 569 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 TAF4O00268 1085 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 DNM1LO00429 736 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 PIK3R2O00459 728 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms