RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ABHD15Q6UXT9 468 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 CTAGE3PQ8IX95 158 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 KBTBD2Q8IY47 623 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 PDIK1LQ8N165 341 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 SHKBP1Q8TBC3 707 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 SKA1Q96BD8 255 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 GMLQ99445 158 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 DDX50Q9BQ39 737 aaKnown RBP14.68□□□□□ -0.06
USH1C-201ENST00000005226 POLIQ9UNA4 740 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 ZNF646O15015 1829 aaPredicted RBP14.68□□□□□ -0.06
USH1C-201ENST00000005226 CLGNO14967 610 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 UGT1A9O60656 530 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 ENO1P06733 434 aaKnown RBP14.67□□□□□ -0.06
USH1C-201ENST00000005226 KRT3P12035 628 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 ACADSP16219 412 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 SP100P23497 879 aaPredicted RBP14.67□□□□□ -0.06
USH1C-201ENST00000005226 ETV4P43268 484 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 SLC25A11Q02978 314 aaKnown RBP14.67□□□□□ -0.06
USH1C-201ENST00000005226 DPYSL3Q14195 570 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 PRKD1Q15139 912 aaPredicted RBP14.67□□□□□ -0.06
USH1C-201ENST00000005226 KLHL38Q2WGJ6 581 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 HSF5Q4G112 596 aaPredicted RBP14.67□□□□□ -0.06
USH1C-201ENST00000005226 STYK1Q6J9G0 422 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 TREML1Q86YW5 311 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 PDCD7Q8N8D1 485 aaKnown RBP14.67□□□□□ -0.06
USH1C-201ENST00000005226 KCTD6Q8NC69 237 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 AKT1S1Q96B36 256 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 FAM136AQ96C01 138 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 SLC13A1Q9BZW2 595 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 UGT1A7Q9HAW7 530 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 UGT1A10Q9HAW8 530 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 UGT1A8Q9HAW9 530 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 SPATS2LQ9NUQ6 558 aaKnown RBP14.67□□□□□ -0.06
USH1C-201ENST00000005226 PGAP2Q9UHJ9 254 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 STYXL1Q9Y6J8 313 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 COL2A1P02458 1487 aaPredicted RBP14.67□□□□□ -0.06
USH1C-201ENST00000005226 CXorf49A8MYA2 514 aaPredicted RBP14.67□□□□□ -0.06
USH1C-201ENST00000005226 VWA5AO00534 786 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 TBC1D12O60347 775 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 PEX10O60683 326 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 STAM2O75886 525 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 ASS1P00966 412 aaKnown RBP14.67□□□□□ -0.06
USH1C-201ENST00000005226 RBP3P10745 1247 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 GNAT1P11488 350 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 CDH8P55286 799 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 TGFB2P61812 414 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 TFAMQ00059 246 aaKnown RBP14.67□□□□□ -0.06
USH1C-201ENST00000005226 GHRHRQ02643 423 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 PPM1NQ8N819 430 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 TEKT4Q8WW24 435 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 OXNAD1Q96HP4 312 aaPredicted RBP14.67□□□□□ -0.06
USH1C-201ENST00000005226 IMPG2Q9BZV3 1241 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 ARHGEF4Q9NR80 690 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 DDX56Q9NY93 547 aaKnown RBP14.67□□□□□ -0.06
USH1C-201ENST00000005226 IKBKGQ9Y6K9 419 aa14.67□□□□□ -0.06
USH1C-201ENST00000005226 B2RBV5 119 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 TM9SF1O15321 606 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 PGM1P36871 562 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 PSMC1P62191 440 aaKnown RBP14.66□□□□□ -0.06
USH1C-201ENST00000005226 BMPR2Q13873 1038 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 RASA2Q15283 850 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 CIAPIN1Q6FI81 312 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 SNRNP48Q6IEG0 339 aaKnown RBP14.66□□□□□ -0.06
USH1C-201ENST00000005226 LRRC74BQ6ZQY2 392 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 DPH6Q7L8W6 267 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 PCGF5Q86SE9 256 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 UBR7Q8N806 425 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 SSU72Q9NP77 194 aaKnown RBP14.66□□□□□ -0.06
USH1C-201ENST00000005226 H3BRJ5 948 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 TOP3BO95985 862 aaKnown RBP14.66□□□□□ -0.06
USH1C-201ENST00000005226 EGFRP00533 1210 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 INHBAP08476 426 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 SERPINB4P48594 390 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 NEK3P51956 506 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 MRPS35P82673 323 aaKnown RBP14.66□□□□□ -0.06
USH1C-201ENST00000005226 ZNF200P98182 395 aaPredicted RBP14.66□□□□□ -0.06
USH1C-201ENST00000005226 KDSRQ06136 332 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 SLC34A1Q06495 639 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 C1orf228Q6PIY5 440 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 KRT27Q7Z3Y8 459 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 SPATA18Q8TC71 538 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 FAM161BQ96MY7 647 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 ANKRD27Q96NW4 1050 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 CYTH2Q99418 400 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 TSC22D3Q99576 134 aa14.66□□□□□ -0.06
USH1C-201ENST00000005226 TRIM49D1C9J1S8 452 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 E7ESA3 106 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 RTP1P59025 263 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 IRX4P78413 519 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 XKR3Q5GH77 459 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 DARS2Q6PI48 645 aaKnown RBP14.65□□□□□ -0.06
USH1C-201ENST00000005226 BBS12Q6ZW61 710 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 SLC25A41Q8N5S1 370 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 ZNF398Q8TD17 642 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 GPRASP2Q96D09 838 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 ACAP3Q96P50 834 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 PORCNQ9H237 461 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 QTRT2Q9H974 415 aaKnown RBP14.65□□□□□ -0.06
USH1C-201ENST00000005226 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.65□□□□□ -0.06
USH1C-201ENST00000005226 PPARGC1AQ9UBK2 798 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms