RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Unc45bQ8CGY6 931 aaKnown RBP13.96□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Alas1Q8VC19 642 aa13.96□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Pcdhb6Q91XZ4 772 aa13.96□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 NamptQ99KQ4 491 aa13.96□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Mms19Q9D071 1031 aa13.96□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Atg7Q9D906 698 aa13.96□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 PrccQ9EQC8 491 aaKnown RBP13.96□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Tmem59Q9QY73 323 aa13.96□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Pcdh7A0A0A6YY83 1255 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Arrdc4A0A0B4J1F4 415 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Ptchd4B9EKX1 904 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Vmn2r17E9PYF5 849 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Zfp94E9Q6Y4 486 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Gm21962L7N280 338 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Ptpn9O35239 593 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 AlbP07724 608 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Ranbp1P34022 203 aaKnown RBP13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Fam207aP58468 219 aaKnown RBP13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Ugt1a2P70691 533 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Slc24a2Q14BI1 711 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Tex35Q14BK3 207 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Aars2Q14CH7 980 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Pih1d3Q3KNI6 218 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Trmt1Q3TX08 663 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Ifnl2Q4VK74 193 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Kctd16Q5DTY9 427 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Baiap3Q80TT2 1134 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Sh3tc2Q80VA5 1289 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Trim32Q8CH72 655 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Smtnl2Q8CI12 456 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Wdr98Q8VC42 657 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Zkscan3Q91VW9 553 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Csde1Q91W50 798 aaKnown RBP13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Tspan17Q9D7W4 270 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Fbxo16Q9QZM9 334 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Cdc42ep5Q9Z0X0 150 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 LctF8VPT3 1931 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Vwa5b1A9Z1V5 1215 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Gm3415J3QMS8 315 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Itgb3O54890 787 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Ppargc1aO70343 797 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Cyp2b10P12791 500 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Eif3eP60229 445 aaKnown RBP13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Arl4cP61208 192 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Dlg3P70175 849 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Irx1P81068 480 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Znf112Q0VAW7 879 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 CttnQ60598 546 aaKnown RBP13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Nlrp4eQ66X19 978 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Q6DFW0 481 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Orai2Q8BH10 250 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Arhgef33Q8BW86 850 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Iqsec1Q8R0S2 961 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Fam114a2Q8VE88 497 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 PlvapQ91VC4 438 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 GldcQ91W43 1025 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Lrrc71Q9D3W5 558 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Tubgcp4Q9D4F8 667 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Gm3404Q9D506 307 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Tmco5aQ9D9D5 303 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Cacna2d3Q9Z1L5 1091 aa13.95□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Gucy2dA0A0U1RPR8 1117 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Atp8b4A2ANX3 1194 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Siah3B2RWG3 268 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Vmn2r84D3YWE3 849 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Vmn2r59E9PUT5 865 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Gm5160F8VPN3 147 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Edil3O35474 480 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Pold2O35654 469 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 AmhP27106 555 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Casp4P70343 373 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Mark3Q03141 753 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Faf2Q3TDN2 445 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Cnga4Q3UW12 575 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Zdhhc18Q5Y5T2 380 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Papss1Q60967 624 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 PostnQ62009 838 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 EfsQ64355 560 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Papd5Q68ED3 633 aaKnown RBP13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 C6.1alQ7M757 291 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Phf8Q80TJ7 1023 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Cplx4Q80WM3 160 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Dpp9Q8BVG4 862 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Dlk2Q8K1E3 382 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Spag16Q8K450 639 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Cd300ldQ8VCH2 221 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Pomgnt1Q91X88 660 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 PdgfdQ925I7 370 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Decr1Q9CQ62 335 aaKnown RBP13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Golga1Q9CW79 758 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 VasnQ9CZT5 673 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Mbtps1Q9WTZ2 1052 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Tmem131O70472 1877 aa13.94□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 1700031M16RikA0A087WSH0 82 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Gm44511A0A0N4SW10 223 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Vmn2r121A2BE32 847 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 DgkdE9PUQ8 1220 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Gimd1E9PW74 217 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 VimP20152 466 aaKnown RBP13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 RarbP22605 482 aa13.93□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms