RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Rhox3hL7MU37 215 aa14.39□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Fam8a1Q3URQ4 399 aa14.39□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Rhox3aQ4TU90 215 aa14.39□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Foxn1Q61575 648 aa14.39□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Map2k2Q63932 401 aa14.39□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Chmp2bQ8BJF9 213 aa14.39□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Ttc22Q8C159 568 aa14.39□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Appl1Q8K3H0 707 aa14.39□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Taf7lQ9D3R9 471 aa14.39□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Spag6Q9JLI7 507 aa14.39□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Klra1P20937 262 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 MafP54843 370 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 CstaP56567 97 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Pcbp1P60335 356 aaKnown RBP14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Gas1Q01721 343 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Afg1lQ3V384 480 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Olfr8Q60892 310 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Zrsr1Q64707 428 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 SugctQ7TNE1 436 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Tdp1Q8BJ37 609 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Sbk1Q8QZX0 417 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Syf2Q9D198 242 aaKnown RBP14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 RecqlQ9Z129 648 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Dhtkd1A2ATU0 921 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Gm3424L7N298 263 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Gm8246M0QWX9 263 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Gnat1P20612 350 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Ppm1aP49443 382 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Xlr3aQ60595 226 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 SnphQ80U23 495 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Mill1Q8HWE7 395 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Vmn1r203Q8R273 311 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Msi2Q920Q6 346 aaKnown RBP14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Ppp1r3aQ99MR9 1089 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Trim10Q9WUH5 489 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Thsd7aQ69ZU6 1645 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Gm2237E9Q501 211 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Hmgxb3G3X9M3 1254 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Gm3591K7N6X2 186 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Anxa8O35640 327 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Slc16a1P53986 493 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 HelqQ2VPA6 1069 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Tgfbrap1Q3UR70 860 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Tmem237Q3V0J1 427 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Zfp943Q6NZP4 507 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Usp20Q8C6M1 916 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Pcdha5Q91Y15 934 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 GhdcQ99J23 532 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Cdk9Q99J95 372 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Rhobtb1Q9DAK3 695 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Znhit2Q9QY66 399 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Usp35M0QWN7 1009 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Ddr1Q03146 911 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Als2clQ60I26 952 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Gpd2Q64521 727 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Znf598Q80YR4 908 aaKnown RBP14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Ints6lQ8BND4 861 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Zdhhc3Q8R173 299 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Polr3cQ9D483 533 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Rab11fip1Q9D620 645 aa14.38□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Ifi206G3UZV2 921 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Oas1aP11928 367 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Pou5f1P20263 352 aaKnown RBP14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Scg3P47867 471 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Il6stQ00560 917 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Ankzf1Q80UU1 748 aaKnown RBP14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Dcun1d2Q8BZJ7 259 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 ClmnQ8C5W0 1052 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 LzicQ8K3C3 190 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Oas1gQ8K469 367 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Ccdc130Q9D516 385 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Cnbd2Q9D5U8 673 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Chek2Q9Z265 546 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Atp8b4A2ANX3 1194 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Birc5O70201 140 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Atp9aO70228 1047 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Uhmk1P97343 419 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Hif1aQ61221 836 aaKnown RBP14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Slitrk1Q810C1 696 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Shisa4Q8CA71 197 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Sik2Q8CFH6 931 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Vwa1Q8R2Z5 415 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Gm379J3QQ19 296 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Pcyt1aP49586 367 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Rplp2P99027 115 aaKnown RBP14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 A1cfQ5YD48 595 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Ecm1Q61508 559 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Prl7b1Q8CGZ9 251 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Stau2Q8CJ67 570 aaKnown RBP14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Homer3Q99JP6 356 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Haus8Q99L00 373 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Trmt11Q9CWH5 460 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Shcbp1Q9Z179 668 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Ttll6A4Q9E8 822 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Aldh2P47738 519 aaKnown RBP14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 PolgP54099 1218 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Mpzl3Q3V3F6 237 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Cyp2c29Q64458 490 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 AarsQ8BGQ7 968 aa14.37□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Leg1Q8C6C9 337 aa14.37□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms