RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Snx8Q8CFD4 459 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 SelenosQ9BCZ4 190 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ddx56Q9D0R4 546 aaKnown RBP9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ankef1Q9D2J7 775 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Myo1hQ9D6A1 958 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 ThegQ9JMB1 375 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Cyp2j6O54750 501 aa9.65□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Aqp1Q02013 269 aa9.65□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Usp17leQ7M764 540 aa9.65□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Pramel6Q810Y9 485 aa9.65□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Kirrel3Q8BR86 778 aa9.65□□□□□ -0.87
Col6a5-201ENSMUST00000165165 GmppbQ8BTZ7 360 aa9.65□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Rfwd3Q8CIK8 774 aa9.65□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Rev1Q920Q2 1249 aa9.65□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Rpap3Q9D706 660 aa9.65□□□□□ -0.87
Col6a5-201ENSMUST00000165165 P01734 135 aa9.65□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ccnd2P30280 289 aa9.65□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Tspyl5Q69ZB3 406 aa9.65□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Polr2eQ80UW8 210 aaKnown RBP9.65□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Tmem63cQ8CBX0 802 aa9.65□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Tsen15Q8R3W5 168 aa9.65□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Rxfp2Q91ZZ5 737 aa9.65□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Mettl7bQ9DD20 244 aa9.65□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Map3k15A2AQW0 1331 aa9.65□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Psmd14O35593 310 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 PolP11369 1281 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Vps33bP59016 617 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Rin3P59729 980 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Cyp2e1Q05421 493 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Atp13a5Q3TYU2 1216 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Plekha6Q7TQG1 1173 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 R3hdm2Q80TM6 1044 aaKnown RBP9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Gpr139Q80UC8 345 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Exosc4Q921I9 245 aaKnown RBP9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ndufaf1Q9CWX2 328 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Msh5Q9QUM7 833 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Mroh6V9GX81 722 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Pabpc1lA2A5N3 607 aaKnown RBP9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Gm5930D3Z257 264 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ifi207E9Q3L4 978 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Atp9aO70228 1047 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 InvsO89019 1062 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ndufaf2Q59J78 168 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Dnajc11Q5U458 559 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ago2Q8CJG0 860 aaKnown RBP9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Plcz1Q8K4D7 647 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Hkdc1Q91W97 915 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ndufaf7Q9CWG8 436 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Katnal2Q9D3R6 539 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Arl6ip4Q9JM93 229 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Lbhd1A0A087WPA0 259 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Zfp266E9Q2S7 604 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Serpinb9cI7HJI5 387 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Smyd5Q3TYX3 416 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Upf3aQ3ULJ3 422 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Afg1lQ3V384 480 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 AsnsQ61024 561 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Vsx2Q61412 361 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 PhgdhQ61753 533 aaKnown RBP9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Psmd11Q8BG32 422 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Atg7Q9D906 698 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Pus3Q9JI38 481 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Rasgrp2Q9QUG9 608 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Slc4a5E9Q3M5 1116 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Gm4340L7N2C4 268 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 OmdO35103 423 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Cyp4a10O88833 509 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Tgm2P21981 686 aaKnown RBP9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ankrd27Q3UMR0 1048 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Zfp512bQ6PHP4 879 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 EnkurQ6SP97 255 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ankrd13aQ80UP5 588 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 RbakQ8BQC8 711 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Mcm8Q9CWV1 833 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 TcimQ9D915 106 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Nphp4P59240 1425 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 CrymO54983 313 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 CatspereP0DP43 985 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Garnl3Q3V0G7 1038 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Esyt3Q5DTI8 891 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Tdrd5Q5VCS6 1040 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Cyp3a11Q64459 504 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 ChfrQ810L3 664 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Trim65Q8BFW4 522 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Olfr1122Q8VGT9 326 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Pwp1Q99LL5 501 aaKnown RBP9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Nudt12Q9DCN1 462 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Myh2G3UW82 1942 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Myh1Q5SX40 1942 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 CblP22682 913 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Rbp3P49194 1234 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ptchd3Q0EEE2 906 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Kdm7aQ3UWM4 940 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Casc4Q6P2L7 435 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Sel1l3Q80TS8 1137 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Snx4Q91YJ2 450 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ten1Q9D7K2 161 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 1700123K08RikQ9D991 295 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Taf8Q9EQH4 308 aa9.64□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Lamc1P02468 1607 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms