RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Stau2Q8CJ67 570 aaKnown RBP10.79□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Znf24Q91VN1 368 aa10.79□□□□□ -0.68
Scn9a-201ENSMUST00000100063 MrrfQ9D6S7 262 aaKnown RBP10.79□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Ripor3A1L3T7 938 aa10.79□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Kif1cO35071 1100 aaKnown RBP10.79□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Mis18bp1Q80WQ8 998 aa10.79□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Ttc7aQ8BGB2 858 aa10.79□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Nemp2Q8CB65 421 aa10.79□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Ndufv1Q91YT0 464 aa10.79□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Myl4P09541 193 aaKnown RBP10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Chrna5Q2MKA5 467 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Crls1Q80ZM8 303 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Nphs1Q9QZS7 1256 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Adamts12Q811B3 1600 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Catsperg2C6KI89 1145 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Akap10O88845 662 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Smad5P97454 465 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Nutm2Q3V0C3 733 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 C1orf109Q499E6 217 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 CttnQ60598 546 aaKnown RBP10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Orc2Q60862 576 aaKnown RBP10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Slc43a1Q8BSM7 564 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Olfr1302Q8VGE9 315 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 TpbpbQ9CQC0 121 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Rfc5Q9D0F6 339 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Add1Q9QYC0 735 aaKnown RBP10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Ssc5dQ8BV57 1371 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Zmym2Q9CU65 1376 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Fam129cD3YZB0 591 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Ncam1P13595 1115 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Olfr1352Q8VGX5 309 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Spg21Q9CQC8 308 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Tomm70Q9CZW5 611 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Usp29Q9ES63 869 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Clcn2Q9R0A1 908 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Med14A2ABV5 1459 aaKnown RBP10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Fam124aD3Z5V4 536 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Pcyt1aP49586 367 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Atp5bP56480 529 aaKnown RBP10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Taf13P61216 124 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Fam214aQ69ZK7 1075 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Vstm4T1NXB5 319 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 StrnO55106 780 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Hdgfl2Q3UMU9 669 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Senp5Q6NXL6 749 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Pcdhgc5Q91XW9 944 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Pcdhb16Q91Y03 802 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Gpc1Q9QZF2 557 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Zscan4-ps3A0A1B0GRH6 506 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Zscan4-ps2A0A1C7CYU6 506 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Ccdc24E9PUW8 296 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Traf2P39429 501 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Lrch1P62046 709 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Rit2P70425 217 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Slc16a10Q3U9N9 512 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Tmem199Q5SYH2 208 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Klhl23Q6GQU2 558 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 TbccQ8VCN9 341 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Q91WD4 421 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Hic1Q9R1Y5 733 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 HnrnpdlQ9Z130 301 aaKnown RBP10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Rlbp1Q9Z275 317 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Wscd2D4PHA7 571 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Vmn2r100E9QAZ9 850 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 BtkP35991 659 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 PkmP52480 531 aaKnown RBP10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Zfp607aQ3TQG9 686 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Slc26a2Q62273 739 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Gm5414Q6IFZ8 552 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Tmem145Q8C4U2 746 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Pglyrp2Q8VCS0 530 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Plscr1Q9JJ00 328 aa10.78□□□□□ -0.68
Scn9a-201ENSMUST00000100063 NuggcD3YWJ0 796 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Bub1O08901 1058 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Epb41l5Q8BGS1 731 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Sh3glb2Q8R3V5 400 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Olfr1353Q8VGU8 309 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 HlcsQ920N2 722 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Med24Q99K74 987 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Kcnh7Q9ER47 1195 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Arih2Q9Z1K6 492 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 MipepA6H611 711 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Erich1E9PY43 332 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 GcatO88986 416 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Fkbp1aP26883 108 aaKnown RBP10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Pacsin1Q61644 441 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Zmynd10Q99ML0 440 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Q9CYI0 393 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Mroh4G3X8W1 983 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Galnt3P70419 633 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Sh3gl1Q62419 368 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Glt8d2Q640P4 349 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Trappc6aQ78XR0 159 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 ScaiQ8C8N2 606 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Rftn2Q8CHX7 500 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Abtb1Q99LJ2 478 aa10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Serbp1Q9CY58 407 aaKnown RBP10.77□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Clk3O35492 638 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Rps6P62754 249 aaKnown RBP10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 NogP97466 232 aa10.77□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms