RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Srsf11E9Q6E5 511 aaKnown RBP14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Msh3P13705 1091 aa14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Calb2Q08331 271 aa14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Arhgap45Q3TBD2 1116 aa14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Smcr8Q3UMB5 935 aa14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Rc3h1Q4VGL6 1130 aaKnown RBP14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Nlrp9cQ66X01 1004 aa14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Gpbp1l1Q6NZP2 473 aa14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Abcf3Q8K268 709 aa14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 PrkceP16054 737 aa14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 HdcP23738 662 aa14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Grm1P97772 1199 aa14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Nfe2Q07279 373 aa14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Cep44Q5HZK1 386 aa14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Myo19Q5SV80 963 aa14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Deup1Q7M6Y5 601 aa14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Q8K2W9 541 aa14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Ciapin1Q8WTY4 309 aa14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Depdc7Q91WS7 511 aa14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Rps6ka4Q9Z2B9 773 aa14.47□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Cdc42bpgQ80UW5 1551 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Gm43518A0A0G2JGB6 165 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Anxa5P48036 319 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Rbp3P49194 1234 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Slc11a2P49282 568 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Tmem165P52875 323 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Adcy6Q01341 1165 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Ifit3Q64345 403 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Casc4Q6P2L7 435 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Kctd3Q8BFX3 815 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Syne4Q8CII8 388 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Nkd1Q99MH6 471 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Q9D9D9 101 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 PgdQ9DCD0 483 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Extl2Q9ES89 330 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 RalbQ9JIW9 206 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Ptpn4Q9WU22 926 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Trpc7Q9WVC5 862 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Gm13941A2AJ38 245 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Vmn2r5K7N788 911 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Igfbp4P47879 254 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 GsapQ3TCV3 858 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 9930111J21Rik1Q5SVP0 844 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 MtrrQ8C1A3 696 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Mcrs1Q99L90 462 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Tada1Q99LM9 335 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Mzt2Q9CQ25 159 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 S100pbpQ9D5K4 396 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 EloblA6PWE0 161 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Itga9B8JK39 1036 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Fcer2P20693 331 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Cd19P25918 547 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 GckP52792 465 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Fam32aQ9CR80 112 aaKnown RBP14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Tssk3Q9D2E1 268 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 PpihQ9D868 188 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 1700123K08RikQ9D991 295 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Tm9sf1Q9DBU0 606 aa14.46□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Scgb2b7D3YYY1 112 aa14.46□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Guca1aP43081 202 aa14.46□□□□□ -0.1
Col3a1-201ENSMUST00000087883 CtshP49935 333 aa14.46□□□□□ -0.1
Col3a1-201ENSMUST00000087883 CebpaP53566 359 aa14.46□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Snx30Q8CE50 437 aa14.46□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Eef1akmt2Q9D853 244 aa14.46□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Dmap1Q9JI44 468 aa14.46□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Top3bQ9Z321 862 aaKnown RBP14.46□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Dennd5bA2RSQ0 1274 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Gm10406A6NAS4 205 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Gm3373A6NAS7 205 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Gm3252E9PUT9 216 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Gm3002E9PW72 216 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Gm3298E9PW80 205 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Gm3468E9QAJ8 216 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Gm3667K7N757 205 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 GclmO09172 274 aaKnown RBP14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Pcsk1P63239 753 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Sephs2P97364 452 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Gm3558Q5FWC9 205 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 RetsatQ64FW2 609 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Mindy1Q76LS9 468 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Ndel1Q9ERR1 345 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Foxo4Q9WVH3 505 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Setbp1Q9Z180 1582 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Gemin4Q6P6L6 1058 aaKnown RBP14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Gpr101Q80T62 511 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Teddm1aQ810U2 305 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 4921511C20RikQ8BVT7 469 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Unc5bQ8K1S3 945 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Fam151aQ8QZW3 608 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Pcdhga4Q91XY4 930 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 PnkpQ9JLV6 522 aaKnown RBP14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Erich1E9PY43 332 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 PolP11369 1281 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Gsdmc2Q2KHK6 480 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Tmem109Q3UBX0 243 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Bpifb5Q3UQ05 490 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Plk4Q64702 925 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Btbd10Q80X66 475 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Asnsd1Q8BFS9 627 aa14.45□□□□□ -0.1
Col3a1-201ENSMUST00000087883 Eme1Q8BJW7 570 aa14.45□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 888.7 ms