RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 DgkdE9PUQ8 1220 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Gm3252E9PUT9 216 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 2010300C02RikE9Q3M9 1175 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Gm3468E9QAJ8 216 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Pcdh9F8VPK8 1237 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Ptpn9O35239 593 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 DffaO54786 331 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Pax3P24610 479 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Serpina5P70458 405 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 PrkczQ02956 592 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Apol7eQ3UZ24 369 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Tdrd5Q5VCS6 1040 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Elf1Q60775 612 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Atl2Q6PA06 583 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Zic5Q7TQ40 622 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Vmn2r43Q80Z08 845 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Aoc2Q812C9 757 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Pnma2Q8BHK0 365 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Fam177a1Q8BR63 207 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Ppfia2Q8BSS9 1257 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Lig4Q8BTF7 911 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Aldh5a1Q8BWF0 523 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Trub1Q8C0D0 338 aaKnown RBP11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Ccdc142Q8CAI1 738 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Olfr30Q8VGD8 315 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Gimap4Q99JY3 219 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Rnf135Q9CWS1 417 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Ttc33Q9D6K7 262 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Dusp21Q9D9D8 189 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Egfl7Q9QXT5 275 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 PfkpQ9WUA3 784 aaKnown RBP11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Tnni1Q9WUZ5 187 aa11.85□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Pcdh7A0A0A6YY83 1255 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Zfp990B1AVN5 605 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Gm281D3Z1Y0 860 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Mroh5E9PUJ8 762 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Gm3460E9QAI8 215 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Mroh4G3X8W1 983 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Zfp850J3QPC5 689 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Dpep1P31428 410 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Wee1P47810 646 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 PfkmP47857 780 aaKnown RBP11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 CtswP56203 371 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Stmn4P63042 189 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Cct5P80316 541 aaKnown RBP11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 InscQ3HNM7 579 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Znf865Q3U3I9 1058 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Lipo3Q3UT41 399 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Gm13103Q4VAD2 491 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Gm11487Q5RIS0 354 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Mxd4Q60948 209 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Papss1Q60967 624 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Tfdp2Q64163 446 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Scube3Q66PY1 993 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Cd300aQ6SJQ0 318 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 C2cd5Q7TPS5 1016 aaKnown RBP11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 EmsyQ8BMB0 1264 aaKnown RBP11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Ugt3a2Q8JZZ0 523 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Wdr98Q8VC42 657 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Gdap1l1Q8VE33 370 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Olfr1502Q8VG66 316 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Ankrd54Q91WK7 299 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Pcdhb6Q91XZ4 772 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Pcdha10Q91Y20 946 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 PpanQ91YU8 470 aaKnown RBP11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Fam49bQ921M7 324 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Aipl1Q924K1 328 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 St13Q99L47 371 aaKnown RBP11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Trem2Q99NH8 227 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Alg13Q9D8C3 1166 aaKnown RBP11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Atg7Q9D906 698 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Smok2bQ9QYZ3 484 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Smok2aQ9QYZ6 504 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Spint1Q9R097 507 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Msl3Q9WVG9 525 aa11.84□□□□□ -0.51
Vamp1-202ENSMUST00000063588 Vmn2r84D3YWE3 849 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Olfr1354E9Q5G9 310 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Fignl2J3QK54 644 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Fgf15O35622 218 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Glb1P23780 647 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Gjb3P28231 270 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Hoxd10P28359 340 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Rab20P35295 233 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Ercc5P35689 1170 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Acsl1P41216 699 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 HpdP49429 393 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 IhhP97812 411 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Pde1bQ01065 535 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Ddr1Q03146 911 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Sox8Q04886 464 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Cntnap5bQ0V8T8 1292 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 GsapQ3TCV3 858 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Srrm1Q52KI8 946 aaKnown RBP11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Foxn1Q61575 648 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 CochQ62507 552 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Xpo1Q6P5F9 1071 aaKnown RBP11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Cd300lfQ6SJQ7 337 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 WtipQ7TQJ8 398 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 PhkbQ7TSH2 1085 aa11.83□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Ankrd45Q810N6 248 aa11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms