RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Lrrc71Q9D3W5 558 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Fam45aQ9D8N2 357 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Wdr19Q3UGF1 1341 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Atp10bB1AWN4 1474 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Tubb1A2AQ07 451 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Ism1A2ATD1 454 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Tpst1O70281 370 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Epha7Q61772 998 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Tmcc2Q80W04 706 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Phtf1Q9QZ09 761 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Ap4b1Q9WV76 738 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Rims2Q9EQZ7 1530 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Gm1758F6VZZ1 202 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Uxs1Q91XL3 420 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Hspa12bQ9CZJ2 685 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Rrn3B2RS91 656 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Atf6F6VAN0 656 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 TsnQ62348 228 aaKnown RBP12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 P2ry10Q8BFU7 328 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Prdm8Q8BZ97 687 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Plac9Q8K262 108 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Sh3glb2Q8R3V5 400 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Scube2Q9JJS0 997 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Znf608Q56A10 1511 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Hnrnph1O35737 449 aaKnown RBP12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Fam91a1Q3UVG3 837 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 BC030870Q3V2G4 71 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Dyrk4Q8BI55 632 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Dennd2aQ8C4S8 1000 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Eva1bQ8K2Y3 164 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Depdc7Q91WS7 511 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Ndufa5Q9CPP6 116 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Pgm3Q9CYR6 542 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 4933425L06RikQ9D3Z8 585 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Tmem245B1AZA5 876 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Fam71dD3YV92 440 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Ccnd1P25322 295 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Hnrnph2P70333 449 aaKnown RBP12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Nqo1Q64669 274 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Tmem161aQ8VCA6 480 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 NlnQ91YP2 704 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Ppp1r3aQ99MR9 1089 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Katnal2Q9D3R6 539 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Fgf15O35622 218 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Gnat1P20612 350 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 AdssP46664 456 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 PrlrQ08501 608 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Orc2Q60862 576 aaKnown RBP12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Gstt1Q64471 240 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Rpap3Q9D706 660 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Oas1eA0A0J9YV76 386 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Rhox3cA2AWM0 215 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Rhox3hL7MU37 215 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Ap3d1O54774 1199 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Pla2g4bP0C871 782 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Rhox3aQ4TU90 215 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Cpa1Q7TPZ8 419 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 ChfrQ810L3 664 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Nars2Q8BGV0 477 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Taldo1Q93092 337 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Itga2bQ9QUM0 1033 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Rnf19bA2A7Q9 732 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Stip1Q60864 543 aaKnown RBP12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Hesx1Q61658 185 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Teddm1aQ810U2 305 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 C8aQ8K182 587 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Q99LU8 229 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Tns3Q5SSZ5 1440 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 B020011L13RikA0A087WQI7 412 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Ccng2O08918 344 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Otud5Q3U2S4 566 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Kcnk18Q6VV64 394 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Tas2r109Q7M707 316 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Pcmtd2Q8BHD8 359 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Tspan14Q8QZY6 270 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Rprd1bQ9CSU0 326 aaKnown RBP12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Scrn1Q9CZC8 414 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Hao1Q9WU19 370 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Smcr8Q3UMB5 935 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Znf473Q8BI67 892 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Glra3Q91XP5 464 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 LactbQ9EP89 551 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Cd86P42082 309 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Clec4fP70194 548 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 FaxcQ3UMF9 409 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 HadhQ61425 314 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 VclQ64727 1066 aaKnown RBP12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Tshz2Q68FE9 1030 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 PmpcbQ9CXT8 489 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 A930018M24RikB7ZMY3 218 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Uchl4P58321 233 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Magee1Q6PCZ4 918 aaKnown RBP12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Peg10Q7TN75 958 aaKnown RBP12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Cops7bQ8BV13 264 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Kank2Q8BX02 843 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Mrpl57Q9CQF8 102 aaKnown RBP12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Fgd3O88842 733 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Tmem237Q3V0J1 427 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Gemin4Q6P6L6 1058 aaKnown RBP12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 CapslQ6P8Y1 208 aa12.34□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms