RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Map3k10Q66L42 940 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Ece2Q80Z60 881 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Q8BGC1 442 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Pdzph1Q8BGR1 1238 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Spata21Q8BHW6 681 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 EtnpplQ8BWU8 499 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Prr33Q8C494 260 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Nrbf2Q8VCQ3 287 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Arl8bQ9CQW2 186 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Gstt4Q9D4P7 240 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Borcs6Q9D6W8 360 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Tm9sf1Q9DBU0 606 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Tmod3Q9JHJ0 352 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Clec4aQ9QZ15 238 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 2210011C24RikA0A087WQ89 206 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Scgb2b21A0A087WQA9 112 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Gm16430A6X8J1 155 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Sptlc1O35704 473 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 ChrngP04760 519 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Pou5f1P20263 352 aaKnown RBP13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Mcpt4P21812 246 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Kpna2P52293 529 aaKnown RBP13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 SnrpfP62307 86 aaKnown RBP13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Alkbh5Q3TSG4 395 aaKnown RBP13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 KhsrpQ3U0V1 748 aaKnown RBP13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 P2rx5Q3UYI1 455 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Tcf12Q61286 706 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Cdc14aQ6GQT0 603 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Dennd2cQ6P9P8 914 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Gm2163Q6PCY5 473 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Pi4kbQ8BKC8 816 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Sik2Q8CFH6 931 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Coq6Q8R1S0 476 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Ankef1Q9D2J7 775 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Slxl1Q9D515 155 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Jph2Q9ET78 696 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 PodxlQ9R0M4 503 aa13.17□□□□□ -0.3
Msh6-201ENSMUST00000005503 Siah3B2RWG3 268 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Smok3aC0HKC8 504 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Smok3bC0HKC9 504 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Glud1P26443 558 aaKnown RBP13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Scg3P47867 471 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Gm10392Q3V3I3 114 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Trpm4Q7TN37 1213 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Svs3bQ8BZH8 265 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Q8CD60 292 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Colgalt1Q8K297 617 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Ciapin1Q8WTY4 309 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 BlvraQ9CY64 295 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 PnkpQ9JLV6 522 aaKnown RBP13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 N4bp2F8VQG7 1678 aaKnown RBP13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Efna5O08543 228 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Serpinb9O08797 374 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 GfapP03995 430 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Atxn10P28658 475 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Slc1a2P43006 572 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Gprin1Q3UNH4 932 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Tfap2bQ61313 459 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Zfyve28Q6ZPK7 905 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Glra2Q7TNC8 452 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 EmsyQ8BMB0 1264 aaKnown RBP13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Slc14a1Q8VHL0 384 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Rhobtb2Q91V93 728 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Trim16Q99PP9 556 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 1700129C05RikQ9CQ77 218 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Gtf2h1Q9DBA9 547 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Rgs3Q9DC04 966 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Ptf1aQ9QX98 324 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Ogfod1Q3U0K8 545 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Znf583Q3V080 568 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Acvrl1Q61288 502 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Thnsl1Q8BH55 747 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Ankrd49Q8VE42 238 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Ubxn2aQ99KJ0 258 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 SncaipQ99ME3 962 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Psmd12Q9D8W5 456 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Dnajc12Q9R022 198 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Atp6v1c1Q9Z1G3 382 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 NalcnQ8BXR5 1738 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Mroh4G3X8W1 983 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Hmgxb3G3X9M3 1254 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Pitpnm1O35954 1243 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Birc5O70201 140 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Mup5P11591 180 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Cd68P31996 326 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Polr1bP70700 1135 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Plk1Q07832 603 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Spink5Q148R4 1017 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Krt32Q62168 407 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Parp6Q6P6P7 630 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Amigo3Q8C2S7 508 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Strip2Q8C9H6 844 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Hdac11Q91WA3 347 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Twf1Q91YR1 350 aaKnown RBP13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Rex1bdQ9CYZ6 169 aa13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 AenQ9CZI9 336 aaKnown RBP13.16□□□□□ -0.3
Msh6-201ENSMUST00000005503 Adcy1O88444 1118 aa13.15□□□□□ -0.3
Msh6-201ENSMUST00000005503 Vps4bP46467 444 aaKnown RBP13.15□□□□□ -0.3
Msh6-201ENSMUST00000005503 Rpl22P67984 128 aaKnown RBP13.15□□□□□ -0.3
Msh6-201ENSMUST00000005503 Slc17a7Q3TXX4 560 aa13.15□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms