RNA–Protein interactions for RNA: YPR008W

HAA1, Transcript of Transcriptional activator involved in adaptation to weak acid stress, yeast

Gene HAA1, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAA1	YPR008W	DAD1	Q12248	94 aa		2	□□□□□ -2.09
HAA1	YPR008W	YCR024C-B	Q3E7Z8	88 aa		2	□□□□□ -2.09
HAA1	YPR008W	SNF11	P38956	169 aa		2	□□□□□ -2.09
HAA1	YPR008W	FIP1	P45976	327 aa		2	□□□□□ -2.09
HAA1	YPR008W	LSM8	P47093	109 aa	Known RBP	2	□□□□□ -2.09
HAA1	YPR008W	YGR025W	P53216	100 aa		2	□□□□□ -2.09
HAA1	YPR008W	CUE4	Q04201	117 aa	Predicted RBP	2	□□□□□ -2.09
HAA1	YPR008W	SEN15	Q04675	128 aa		2	□□□□□ -2.09
HAA1	YPR008W	YPR063C	Q12160	140 aa		2	□□□□□ -2.09
HAA1	YPR008W	CPT1	P17898	393 aa		1.99	□□□□□ -2.09
HAA1	YPR008W	ZRT1	P32804	376 aa		1.99	□□□□□ -2.09
HAA1	YPR008W	RPB11	P38902	120 aa		1.99	□□□□□ -2.09
HAA1	YPR008W	RPA43	P46669	326 aa		1.99	□□□□□ -2.09
HAA1	YPR008W	OST3	P48439	350 aa		1.99	□□□□□ -2.09
HAA1	YPR008W	PRM3	Q08931	133 aa		1.99	□□□□□ -2.09
HAA1	YPR008W	CSM4	Q08955	156 aa		1.99	□□□□□ -2.09
HAA1	YPR008W	YPR013C	Q12145	317 aa		1.99	□□□□□ -2.09
HAA1	YPR008W	UTP23	Q12339	254 aa	Known RBP	1.99	□□□□□ -2.09
HAA1	YPR008W	MRPL23	Q12487	163 aa	Predicted RBP	1.99	□□□□□ -2.09
HAA1	YPR008W	RPS22B	Q3E7Y3	130 aa	Known RBP	1.99	□□□□□ -2.09
HAA1	YPR008W	YLR342W-A	Q3E810	57 aa		1.99	□□□□□ -2.09
HAA1	YPR008W	PAU7	P39545	55 aa		1.98	□□□□□ -2.09
HAA1	YPR008W	TDA4	P47153	279 aa		1.98	□□□□□ -2.09
HAA1	YPR008W	SDS23	P53172	527 aa		1.98	□□□□□ -2.09
HAA1	YPR008W	CAX4	P53223	239 aa		1.98	□□□□□ -2.09
HAA1	YPR008W	ARC18	Q05933	178 aa	Known RBP	1.98	□□□□□ -2.09
HAA1	YPR008W	ATG39	Q06159	398 aa		1.98	□□□□□ -2.09
HAA1	YPR008W	YIL134C-A	Q45U18	67 aa		1.98	□□□□□ -2.09
HAA1	YPR008W	SEC4	P07560	215 aa	Known RBP	1.98	□□□□□ -2.09
HAA1	YPR008W	RPL23A	P0CX41	137 aa	Known RBP	1.98	□□□□□ -2.09
HAA1	YPR008W	RPL23B	P0CX42	137 aa	Known RBP	1.98	□□□□□ -2.09
HAA1	YPR008W	MRPL11	P36521	249 aa	Predicted RBP	1.98	□□□□□ -2.09
HAA1	YPR008W	CGR1	P53188	120 aa		1.98	□□□□□ -2.09
HAA1	YPR008W	THG1	P53215	237 aa	Known RBP	1.98	□□□□□ -2.09
HAA1	YPR008W	UPS3	Q04006	179 aa		1.98	□□□□□ -2.09
HAA1	YPR008W	MSA1	Q08471	629 aa		1.98	□□□□□ -2.09
HAA1	YPR008W	POM33	Q12164	279 aa		1.98	□□□□□ -2.09
HAA1	YPR008W	PRM7	Q12459	698 aa		1.98	□□□□□ -2.09
HAA1	YPR008W	YNL146C-A	Q3E7Z1	64 aa		1.98	□□□□□ -2.09
HAA1	YPR008W	YHR212W-A	P0CX91	67 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	TEM1	P38987	245 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	SPI1	P40092	148 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	MRPL49	P40858	161 aa	Predicted RBP	1.97	□□□□□ -2.09
HAA1	YPR008W	COX16	P47081	118 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	YGL118C	P53132	145 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	YIP3	P53633	176 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	RRG8	Q06109	277 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	FSF1	Q12029	327 aa	Known RBP	1.97	□□□□□ -2.09
HAA1	YPR008W	CCW12	Q12127	133 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	YOR097C	Q12274	175 aa	Predicted RBP	1.97	□□□□□ -2.09
HAA1	YPR008W	TIM22	Q12328	207 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	YOR011W-A	Q3E807	68 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	COA6	Q3E846	104 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	RPL27A	P0C2H6	136 aa	Known RBP	1.97	□□□□□ -2.09
HAA1	YPR008W	GSP1	P32835	219 aa	Known RBP	1.97	□□□□□ -2.09
HAA1	YPR008W	GSP2	P32836	220 aa	Known RBP	1.97	□□□□□ -2.09
HAA1	YPR008W	YKL102C	P34249	101 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	PRY2	P36110	329 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	YHR022C	P38763	256 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	YNL200C	P40165	246 aa	Known RBP	1.97	□□□□□ -2.09
HAA1	YPR008W	CDC40	P40968	455 aa	Predicted RBP	1.97	□□□□□ -2.09
HAA1	YPR008W	IGD1	P43598	195 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	KEG1	P43614	200 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	ERV14	P53173	138 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	BRP1	P53194	125 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	WIP1	Q2V2P8	89 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	TAR1	Q8TGM6	124 aa		1.97	□□□□□ -2.09
HAA1	YPR008W	RPL16A	P26784	199 aa	Known RBP	1.96	□□□□□ -2.1
HAA1	YPR008W	UTR5	P32630	166 aa		1.96	□□□□□ -2.1
HAA1	YPR008W	YKR032W	P36127	104 aa		1.96	□□□□□ -2.1
HAA1	YPR008W	YHR140W	P38842	239 aa		1.96	□□□□□ -2.1
HAA1	YPR008W	SEC72	P39742	193 aa	Known RBP	1.96	□□□□□ -2.1
HAA1	YPR008W	YER134C	P40081	178 aa		1.96	□□□□□ -2.1
HAA1	YPR008W	MIC26	P50087	233 aa		1.96	□□□□□ -2.1
HAA1	YPR008W	YGR017W	P53210	297 aa		1.96	□□□□□ -2.1
HAA1	YPR008W	GTO3	Q04806	366 aa		1.96	□□□□□ -2.1
HAA1	YPR008W	YPL162C	Q12042	273 aa		1.96	□□□□□ -2.1
HAA1	YPR008W	YOL085C	Q99345	113 aa		1.96	□□□□□ -2.1
HAA1	YPR008W	VAR1	P02381	398 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	FUN14	P18411	198 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	SCM4	P32564	187 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	TOA2	P32774	122 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	PAU16	P35994	123 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	PET8	P38921	284 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	YER135C	P40082	130 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	YJL028W	P47062	111 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	DIA1	P54005	336 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	MRPS8	Q03799	155 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	GPI19	Q04082	140 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	MPC2	P38857	129 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	AGE2	P40529	298 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	ALG13	P53178	202 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	YIL014C-A	Q02598	104 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	MGR2	Q02889	113 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	YMR244W	Q04018	355 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	CNL1	Q06333	122 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	YBR200W-A	Q3E755	54 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	YGR035W-A	Q45U48	73 aa		1.95	□□□□□ -2.1
HAA1	YPR008W	RPL16B	P26785	198 aa	Known RBP	1.94	□□□□□ -2.1
HAA1	YPR008W	ECM33	P38248	429 aa	Known RBP	1.94	□□□□□ -2.1

Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms