RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W LST8P41318 303 aa1.8□□□□□ -2.12
SEC16YPL085W GON7P46984 123 aa1.8□□□□□ -2.12
SEC16YPL085W YMR317WQ04893 1140 aa1.8□□□□□ -2.12
SEC16YPL085W VTS1Q08831 523 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
SEC16YPL085W MEC1P38111 2368 aa1.8□□□□□ -2.12
SEC16YPL085W STE18P18852 110 aa1.8□□□□□ -2.12
SEC16YPL085W COX10P21592 462 aa1.8□□□□□ -2.12
SEC16YPL085W YKL183C-AQ3E765 70 aa1.8□□□□□ -2.12
SEC16YPL085W IGO2Q9P305 131 aa1.8□□□□□ -2.12
SEC16YPL085W YHR130CP38834 111 aa1.8□□□□□ -2.12
SEC16YPL085W YER181CP40097 107 aa1.8□□□□□ -2.12
SEC16YPL085W YPL073CP40323 161 aa1.8□□□□□ -2.12
SEC16YPL085W UBP8P50102 471 aa1.8□□□□□ -2.12
SEC16YPL085W YPS5P53057 165 aa1.8□□□□□ -2.12
SEC16YPL085W YGL194C-AQ2V2P6 80 aa1.8□□□□□ -2.12
SEC16YPL085W YIR020CP40575 100 aa1.79□□□□□ -2.12
SEC16YPL085W THG1P53215 237 aaKnown RBP1.79□□□□□ -2.12
SEC16YPL085W YMR252CQ04814 134 aa1.79□□□□□ -2.12
SEC16YPL085W RDL1Q12305 139 aaKnown RBP1.79□□□□□ -2.12
SEC16YPL085W OM14P38325 134 aa1.79□□□□□ -2.12
SEC16YPL085W PRE5P40302 234 aaKnown RBP1.79□□□□□ -2.12
SEC16YPL085W YNL234WP53857 426 aa1.79□□□□□ -2.12
SEC16YPL085W POC4Q12245 148 aaPredicted RBP1.79□□□□□ -2.12
SEC16YPL085W SEN1Q00416 2231 aaKnown RBP1.79□□□□□ -2.12
SEC16YPL085W QRI5P32344 111 aa1.79□□□□□ -2.12
SEC16YPL085W ECM33P38248 429 aaKnown RBP1.79□□□□□ -2.12
SEC16YPL085W OXA1P39952 402 aa1.79□□□□□ -2.12
SEC16YPL085W AIM19P40502 157 aa1.79□□□□□ -2.12
SEC16YPL085W RDS3Q06835 107 aaPredicted RBP1.79□□□□□ -2.12
SEC16YPL085W YOR192C-CQ3E736 78 aa1.79□□□□□ -2.12
SEC16YPL085W RPL29P05747 59 aaPredicted RBP1.79□□□□□ -2.12
SEC16YPL085W AGA2P32781 87 aa1.79□□□□□ -2.12
SEC16YPL085W SNU13P39990 126 aaKnown RBP1.79□□□□□ -2.12
SEC16YPL085W YGR050CP53231 118 aa1.79□□□□□ -2.12
SEC16YPL085W PBP4Q07362 185 aaKnown RBP1.79□□□□□ -2.12
SEC16YPL085W YCR025CP25352 136 aa1.79□□□□□ -2.12
SEC16YPL085W YHP1Q04116 353 aa1.79□□□□□ -2.12
SEC16YPL085W DPP1Q05521 289 aa1.79□□□□□ -2.12
SEC16YPL085W DAT1P13483 248 aaKnown RBP1.78□□□□□ -2.12
SEC16YPL085W YNL200CP40165 246 aaKnown RBP1.78□□□□□ -2.12
SEC16YPL085W POS5Q06892 414 aa1.78□□□□□ -2.12
SEC16YPL085W YPL261CQ08976 102 aa1.78□□□□□ -2.12
SEC16YPL085W RTG1P32607 177 aa1.78□□□□□ -2.12
SEC16YPL085W HOT13P36078 116 aa1.78□□□□□ -2.12
SEC16YPL085W ECM14P38836 430 aa1.78□□□□□ -2.12
SEC16YPL085W VMA21P41806 77 aa1.78□□□□□ -2.12
SEC16YPL085W VPS55P47111 140 aa1.78□□□□□ -2.12
SEC16YPL085W CYT2Q00873 224 aa1.78□□□□□ -2.12
SEC16YPL085W AYT1Q12226 474 aa1.78□□□□□ -2.12
SEC16YPL085W TPT1Q12272 230 aaKnown RBP1.78□□□□□ -2.12
SEC16YPL085W YCL042WP25572 119 aa1.78□□□□□ -2.12
SEC16YPL085W SIM1P40472 476 aa1.78□□□□□ -2.12
SEC16YPL085W PIR5P46999 287 aa1.78□□□□□ -2.12
SEC16YPL085W YJL028WP47062 111 aa1.78□□□□□ -2.12
SEC16YPL085W BET5Q03630 159 aa1.78□□□□□ -2.12
SEC16YPL085W PAI3P01094 68 aa1.78□□□□□ -2.12
SEC16YPL085W YPT53P36019 220 aa1.78□□□□□ -2.12
SEC16YPL085W NRG2P38082 220 aa1.78□□□□□ -2.12
SEC16YPL085W SGF11Q03067 99 aa1.78□□□□□ -2.12
SEC16YPL085W INP1Q03694 420 aa1.78□□□□□ -2.12
SEC16YPL085W FCF1Q05498 189 aaPredicted RBP1.78□□□□□ -2.12
SEC16YPL085W RPL43AP0CX25 92 aaKnown RBP1.78□□□□□ -2.13
SEC16YPL085W RPL43BP0CX26 92 aa1.78□□□□□ -2.13
SEC16YPL085W MTR2P34232 184 aaKnown RBP1.78□□□□□ -2.13
SEC16YPL085W MRPL38P35996 138 aaPredicted RBP1.78□□□□□ -2.13
SEC16YPL085W YGL230CP53074 147 aa1.78□□□□□ -2.13
SEC16YPL085W MET32Q12041 191 aa1.78□□□□□ -2.13
SEC16YPL085W YLR194CQ05777 254 aa1.77□□□□□ -2.13
SEC16YPL085W YIL102C-AQ2V2P5 75 aa1.77□□□□□ -2.13
SEC16YPL085W VHS2P40463 436 aa1.77□□□□□ -2.13
SEC16YPL085W TOS8P53147 276 aa1.77□□□□□ -2.13
SEC16YPL085W BEM2P39960 2167 aaKnown RBP1.77□□□□□ -2.13
SEC16YPL085W SAL1D6W196 494 aa1.77□□□□□ -2.13
SEC16YPL085W RPL11AP0C0W9 174 aaKnown RBP1.77□□□□□ -2.13
SEC16YPL085W CUP2P15315 225 aa1.77□□□□□ -2.13
SEC16YPL085W IMP2P46972 177 aa1.77□□□□□ -2.13
SEC16YPL085W HPA2Q06592 156 aa1.77□□□□□ -2.13
SEC16YPL085W RPL11BQ3E757 174 aaPredicted RBP1.77□□□□□ -2.13
SEC16YPL085W VTC1P40046 129 aaRIP-Chip data1.77□□□□□ -2.13 RIP-Chip
SEC16YPL085W RTC6O14464 93 aa1.76□□□□□ -2.13
SEC16YPL085W TDA2P40045 126 aa1.76□□□□□ -2.13
SEC16YPL085W YOR015WQ12169 119 aa1.76□□□□□ -2.13
SEC16YPL085W SOD1P00445 154 aaKnown RBP1.76□□□□□ -2.13
SEC16YPL085W YCR050CP25630 102 aa1.76□□□□□ -2.13
SEC16YPL085W MRPL28P36527 147 aa1.76□□□□□ -2.13
SEC16YPL085W MYO1P08964 1928 aa1.76□□□□□ -2.13
SEC16YPL085W YKL070WP36087 169 aa1.76□□□□□ -2.13
SEC16YPL085W YNL195CP40168 261 aa1.76□□□□□ -2.13
SEC16YPL085W YGR269WP40326 108 aa1.76□□□□□ -2.13
SEC16YPL085W RPR2P40571 144 aa1.76□□□□□ -2.13
SEC16YPL085W YFR054CP43622 192 aa1.76□□□□□ -2.13
SEC16YPL085W DAD4P69851 72 aa1.76□□□□□ -2.13
SEC16YPL085W RRT7Q07829 113 aa1.76□□□□□ -2.13
SEC16YPL085W MRPL24P36525 258 aaPredicted RBP1.76□□□□□ -2.13
SEC16YPL085W DUR1,2P32528 1835 aaKnown RBP1.76□□□□□ -2.13
SEC16YPL085W FIP1P45976 327 aa1.76□□□□□ -2.13
SEC16YPL085W BNS1P50084 137 aa1.76□□□□□ -2.13
SEC16YPL085W YBR298C-AQ8TGK4 73 aa1.76□□□□□ -2.13
SEC16YPL085W YBL039W-BP0C268 59 aa1.75□□□□□ -2.13
SEC16YPL085W RPC10P40422 70 aa1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms