RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W DUO1P53168 247 aaKnown RBP10.85□□□□□ -0.67
SHR5YOL110W YBR200W-AQ3E755 54 aa10.85□□□□□ -0.67
SHR5YOL110W SEC4P07560 215 aaKnown RBP10.84□□□□□ -0.67
SHR5YOL110W FSF1Q12029 327 aaKnown RBP10.84□□□□□ -0.67
SHR5YOL110W CYC7P00045 113 aa10.83□□□□□ -0.68
SHR5YOL110W RPL16BP26785 198 aaKnown RBP10.83□□□□□ -0.68
SHR5YOL110W ELF1P36053 145 aa10.83□□□□□ -0.68
SHR5YOL110W MRPL28P36527 147 aa10.82□□□□□ -0.68
SHR5YOL110W DXO1Q06349 442 aa10.82□□□□□ -0.68
SHR5YOL110W BRP1P53194 125 aa10.81□□□□□ -0.68
SHR5YOL110W YPR053CQ6Q5F3 151 aa10.8□□□□□ -0.68
SHR5YOL110W VHS2P40463 436 aa10.79□□□□□ -0.68
SHR5YOL110W NRG2P38082 220 aa10.78□□□□□ -0.68
SHR5YOL110W SEC72P39742 193 aaKnown RBP10.78□□□□□ -0.68
SHR5YOL110W AIM34Q03673 198 aa10.78□□□□□ -0.68
SHR5YOL110W TVP18Q04767 167 aa10.78□□□□□ -0.68
SHR5YOL110W CMC2Q3E7A4 109 aa10.78□□□□□ -0.68
SHR5YOL110W SSS1P35179 80 aa10.77□□□□□ -0.69
SHR5YOL110W SDH8P38345 138 aa10.77□□□□□ -0.69
SHR5YOL110W YCH1P42937 148 aa10.77□□□□□ -0.69
SHR5YOL110W YCR075W-AQ3E830 75 aa10.77□□□□□ -0.69
SHR5YOL110W RRT13P40042 185 aa10.76□□□□□ -0.69
SHR5YOL110W MED7Q08278 222 aa10.76□□□□□ -0.69
SHR5YOL110W YKR032WP36127 104 aa10.75□□□□□ -0.69
SHR5YOL110W YGL118CP53132 145 aa10.75□□□□□ -0.69
SHR5YOL110W YBR126W-AQ8TGU7 68 aa10.75□□□□□ -0.69
SHR5YOL110W YCR001WP25347 104 aa10.73□□□□□ -0.69
SHR5YOL110W YLR042CQ07990 161 aa10.73□□□□□ -0.69
SHR5YOL110W KTI12P34253 313 aaKnown RBP10.72□□□□□ -0.69
SHR5YOL110W CUE4Q04201 117 aaPredicted RBP10.72□□□□□ -0.69
SHR5YOL110W RPL42AP0CX27 106 aaKnown RBP10.71□□□□□ -0.69
SHR5YOL110W RPL42BP0CX28 106 aaKnown RBP10.71□□□□□ -0.69
SHR5YOL110W PET8P38921 284 aa10.71□□□□□ -0.69
SHR5YOL110W YPS5P53057 165 aa10.71□□□□□ -0.69
SHR5YOL110W AUA1P32450 94 aa10.69□□□□□ -0.7
SHR5YOL110W GSP1P32835 219 aaKnown RBP10.69□□□□□ -0.7
SHR5YOL110W GSP2P32836 220 aaKnown RBP10.69□□□□□ -0.7
SHR5YOL110W SGF11Q03067 99 aa10.69□□□□□ -0.7
SHR5YOL110W VAM10Q08474 114 aa10.69□□□□□ -0.7
SHR5YOL110W TEM1P38987 245 aa10.68□□□□□ -0.7
SHR5YOL110W YER134CP40081 178 aa10.68□□□□□ -0.7
SHR5YOL110W YNL200CP40165 246 aaKnown RBP10.68□□□□□ -0.7
SHR5YOL110W SCW10Q04951 389 aa10.68□□□□□ -0.7
SHR5YOL110W RDS3Q06835 107 aaPredicted RBP10.68□□□□□ -0.7
SHR5YOL110W YRA2P36036 203 aaKnown RBP RIP-Chip data10.67□□□□□ -0.7not detected
SHR5YOL110W YNL217WP40152 326 aa10.67□□□□□ -0.7
SHR5YOL110W SAL1D6W196 494 aa10.66□□□□□ -0.7
SHR5YOL110W YCR023CP25351 611 aa10.66□□□□□ -0.7
SHR5YOL110W YER076CP40049 302 aa10.66□□□□□ -0.7
SHR5YOL110W OST3P48439 350 aa10.66□□□□□ -0.7
SHR5YOL110W YPR014CQ6B0W2 109 aa10.66□□□□□ -0.7
SHR5YOL110W ATP23P53722 227 aa10.65□□□□□ -0.7
SHR5YOL110W SEN15Q04675 128 aa10.65□□□□□ -0.7
SHR5YOL110W YIL014C-AQ02598 104 aa10.64□□□□□ -0.71
SHR5YOL110W DGA1Q08650 418 aa10.64□□□□□ -0.71
SHR5YOL110W PFY1P07274 126 aa10.63□□□□□ -0.71
SHR5YOL110W MRPL11P36521 249 aaPredicted RBP10.63□□□□□ -0.71
SHR5YOL110W DCV1P43595 202 aa10.63□□□□□ -0.71
SHR5YOL110W MGR2Q02889 113 aa10.63□□□□□ -0.71
SHR5YOL110W YGR240C-AQ3E786 66 aa10.63□□□□□ -0.71
SHR5YOL110W KRE9P39005 276 aa10.62□□□□□ -0.71
SHR5YOL110W ERG27Q12452 347 aaKnown RBP10.62□□□□□ -0.71
SHR5YOL110W COA6Q3E846 104 aa10.62□□□□□ -0.71
SHR5YOL110W YIL134C-AQ45U18 67 aa10.62□□□□□ -0.71
SHR5YOL110W HTL1Q9URQ5 78 aa10.62□□□□□ -0.71
SHR5YOL110W GLO1P50107 326 aa10.61□□□□□ -0.71
SHR5YOL110W HAL1Q01766 294 aa10.61□□□□□ -0.71
SHR5YOL110W AQY1P0CD91 305 aa10.58□□□□□ -0.72
SHR5YOL110W RPS8AP0CX39 200 aaKnown RBP10.58□□□□□ -0.72
SHR5YOL110W RPS8BP0CX40 200 aaKnown RBP10.58□□□□□ -0.72
SHR5YOL110W YKR070WP36151 352 aaKnown RBP10.58□□□□□ -0.72
SHR5YOL110W CDC40P40968 455 aaPredicted RBP10.58□□□□□ -0.72
SHR5YOL110W ERV14P53173 138 aa10.58□□□□□ -0.72
SHR5YOL110W PMP3P87284 55 aa10.58□□□□□ -0.72
SHR5YOL110W PRE1P22141 198 aaKnown RBP10.57□□□□□ -0.72
SHR5YOL110W YPT53P36019 220 aa10.57□□□□□ -0.72
SHR5YOL110W FCF1Q05498 189 aaPredicted RBP10.57□□□□□ -0.72
SHR5YOL110W PCL2P25693 308 aa10.56□□□□□ -0.72
SHR5YOL110W YJL028WP47062 111 aa10.56□□□□□ -0.72
SHR5YOL110W TOS6P48560 102 aa10.56□□□□□ -0.72
SHR5YOL110W POP3P53833 195 aaPredicted RBP10.56□□□□□ -0.72
SHR5YOL110W PAU16P35994 123 aa10.54□□□□□ -0.72
SHR5YOL110W CRC1Q12289 327 aa10.54□□□□□ -0.72
SHR5YOL110W DPP1Q05521 289 aa10.53□□□□□ -0.72
SHR5YOL110W CNL1Q06333 122 aa10.53□□□□□ -0.72
SHR5YOL110W YOR008C-AQ3E7B9 74 aa10.53□□□□□ -0.72
SHR5YOL110W UBC5P15732 148 aa10.52□□□□□ -0.73
SHR5YOL110W YDR042CQ03205 200 aa10.52□□□□□ -0.73
SHR5YOL110W RPL27BP0C2H7 136 aaKnown RBP10.5□□□□□ -0.73
SHR5YOL110W HMRA2P0CY13 119 aa10.49□□□□□ -0.73
SHR5YOL110W RPL16AP26784 199 aaKnown RBP10.49□□□□□ -0.73
SHR5YOL110W YBR209WP38311 105 aa10.49□□□□□ -0.73
SHR5YOL110W URM1P40554 99 aaPredicted RBP10.49□□□□□ -0.73
SHR5YOL110W YJR146WP47174 117 aa10.48□□□□□ -0.73
SHR5YOL110W CGR1P53188 120 aa10.48□□□□□ -0.73
SHR5YOL110W ERI1P62651 68 aaKnown RBP10.48□□□□□ -0.73
SHR5YOL110W PKR1Q03880 122 aaKnown RBP10.48□□□□□ -0.73
SHR5YOL110W ADH2P00331 348 aaKnown RBP10.47□□□□□ -0.73
SHR5YOL110W MRP49P32388 137 aa10.47□□□□□ -0.73
SHR5YOL110W FYV4P38783 130 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms