RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C HPA2Q06592 156 aa-0.39□□□□□ -2.47
NIP1YMR309C YOR1P53049 1477 aa-0.4□□□□□ -2.47
NIP1YMR309C SPC3Q12133 184 aa-0.4□□□□□ -2.47
NIP1YMR309C YRF1-2P40105 1681 aa-0.4□□□□□ -2.47
NIP1YMR309C RPO41P13433 1351 aaKnown RBP-0.4□□□□□ -2.47
NIP1YMR309C GCV3P39726 170 aaPredicted RBP-0.4□□□□□ -2.47
NIP1YMR309C PKR1Q03880 122 aaKnown RBP-0.4□□□□□ -2.47
NIP1YMR309C YCR050CP25630 102 aa-0.41□□□□□ -2.48
NIP1YMR309C YIL014C-AQ02598 104 aa-0.41□□□□□ -2.48
NIP1YMR309C SLO1Q3E784 85 aa-0.41□□□□□ -2.48
NIP1YMR309C TY1B-BLQ12490 1755 aa-0.41□□□□□ -2.48
NIP1YMR309C YAL064WP39711 94 aa-0.42□□□□□ -2.48
NIP1YMR309C RSF2P46974 1380 aa-0.42□□□□□ -2.48
NIP1YMR309C HPM1P40481 377 aa-0.42□□□□□ -2.48
NIP1YMR309C YIL086CP40503 102 aa-0.42□□□□□ -2.48
NIP1YMR309C YGR039WP53225 103 aa-0.42□□□□□ -2.48
NIP1YMR309C YCL048W-AQ2V2Q2 79 aa-0.42□□□□□ -2.48
NIP1YMR309C COX19Q3E731 98 aa-0.42□□□□□ -2.48
NIP1YMR309C PET54P10834 293 aa-0.43□□□□□ -2.48
NIP1YMR309C YBR016WP38216 128 aa-0.43□□□□□ -2.48
NIP1YMR309C ELC1Q03071 99 aa-0.43□□□□□ -2.48
NIP1YMR309C YGR164WP53291 111 aa-0.43□□□□□ -2.48
NIP1YMR309C GRX3Q03835 250 aa-0.43□□□□□ -2.48
NIP1YMR309C SHU1P38751 150 aa-0.44□□□□□ -2.48
NIP1YMR309C ERV14P53173 138 aa-0.44□□□□□ -2.48
NIP1YMR309C SGF11Q03067 99 aa-0.44□□□□□ -2.48
NIP1YMR309C DNA2P38859 1522 aa-0.44□□□□□ -2.48
NIP1YMR309C YLR255CO13574 117 aa-0.44□□□□□ -2.48
NIP1YMR309C RPS11AP0CX47 156 aaKnown RBP-0.44□□□□□ -2.48
NIP1YMR309C RPS11BP0CX48 156 aaKnown RBP-0.44□□□□□ -2.48
NIP1YMR309C SEC59P20048 519 aa-0.44□□□□□ -2.48
NIP1YMR309C YNL198CP40166 100 aa-0.44□□□□□ -2.48
NIP1YMR309C YMR320WQ04897 101 aa-0.44□□□□□ -2.48
NIP1YMR309C YLR285C-AQ3E771 56 aa-0.44□□□□□ -2.48
NIP1YMR309C TY1B-LR3P0C2I6 1755 aaKnown RBP-0.44□□□□□ -2.48
NIP1YMR309C TY1B-PR3P0C2J1 1755 aaKnown RBP-0.44□□□□□ -2.48
NIP1YMR309C CHD1P32657 1468 aa-0.45□□□□□ -2.48
NIP1YMR309C RPL14AP36105 138 aaKnown RBP-0.45□□□□□ -2.48
NIP1YMR309C RPL14BP38754 138 aaKnown RBP-0.45□□□□□ -2.48
NIP1YMR309C CYB5P40312 120 aa-0.45□□□□□ -2.48
NIP1YMR309C GAT4P40569 121 aa-0.45□□□□□ -2.48
NIP1YMR309C CNL1Q06333 122 aa-0.45□□□□□ -2.48
NIP1YMR309C RPC19P28000 142 aaKnown RBP-0.45□□□□□ -2.48
NIP1YMR309C MPC2P38857 129 aa-0.45□□□□□ -2.48
NIP1YMR309C YLR363W-AQ3E747 85 aa-0.45□□□□□ -2.48
NIP1YMR309C OST5Q92316 86 aa-0.45□□□□□ -2.48
NIP1YMR309C TOP2P06786 1428 aaKnown RBP-0.46□□□□□ -2.48
NIP1YMR309C YFR009W-AP0C5M9 85 aa-0.46□□□□□ -2.48
NIP1YMR309C RBL2P48606 106 aaKnown RBP-0.46□□□□□ -2.48
NIP1YMR309C RUB1Q03919 77 aa-0.46□□□□□ -2.48
NIP1YMR309C YNL277W-AQ3E7Z0 62 aa-0.46□□□□□ -2.48
NIP1YMR309C COX23P38824 151 aa-0.46□□□□□ -2.48
NIP1YMR309C RPS29AP41057 56 aaKnown RBP-0.46□□□□□ -2.48
NIP1YMR309C MOG1P47123 218 aa-0.46□□□□□ -2.48
NIP1YMR309C YGR042WP53227 271 aa-0.46□□□□□ -2.48
NIP1YMR309C RPL22BP56628 122 aaKnown RBP-0.46□□□□□ -2.48
NIP1YMR309C GPI19Q04082 140 aa-0.46□□□□□ -2.48
NIP1YMR309C TVP18Q04767 167 aa-0.46□□□□□ -2.48
NIP1YMR309C Q0144Q9ZZW2 109 aa-0.46□□□□□ -2.48
NIP1YMR309C DYN1P36022 4092 aa-0.46□□□□□ -2.48
NIP1YMR309C YKL044WP36092 106 aa-0.47□□□□□ -2.48
NIP1YMR309C YIR020CP40575 100 aa-0.47□□□□□ -2.48
NIP1YMR309C YPL261CQ08976 102 aa-0.47□□□□□ -2.49
NIP1YMR309C IMP2P46972 177 aa-0.48□□□□□ -2.49
NIP1YMR309C YDR210WQ03482 75 aa-0.48□□□□□ -2.49
NIP1YMR309C PMD1P32634 1753 aa-0.48□□□□□ -2.49
NIP1YMR309C ACP1P32463 125 aa-0.48□□□□□ -2.49
NIP1YMR309C PAU12P53343 120 aa-0.48□□□□□ -2.49
NIP1YMR309C PCC1Q3E833 88 aa-0.48□□□□□ -2.49
NIP1YMR309C POP7P38291 140 aa-0.49□□□□□ -2.49
NIP1YMR309C FRQ1Q06389 190 aa-0.49□□□□□ -2.49
NIP1YMR309C MYO2P19524 1574 aaKnown RBP-0.49□□□□□ -2.49
NIP1YMR309C RAD50P12753 1312 aa-0.49□□□□□ -2.49
NIP1YMR309C NTE1Q04958 1679 aa-0.49□□□□□ -2.49
NIP1YMR309C YCR101CP25607 182 aa-0.49□□□□□ -2.49
NIP1YMR309C YOL118CQ08259 102 aa-0.49□□□□□ -2.49
NIP1YMR309C CAT8P39113 1433 aa-0.5□□□□□ -2.49
NIP1YMR309C HMRA2P0CY13 119 aa-0.5□□□□□ -2.49
NIP1YMR309C TRS20P38334 175 aa-0.5□□□□□ -2.49
NIP1YMR309C SNF11P38956 169 aa-0.5□□□□□ -2.49
NIP1YMR309C YER187WP40102 141 aa-0.5□□□□□ -2.49
NIP1YMR309C SFT1P43682 97 aa-0.5□□□□□ -2.49
NIP1YMR309C SNN1P48232 102 aa-0.5□□□□□ -2.49
NIP1YMR309C COX12Q01519 83 aa-0.5□□□□□ -2.49
NIP1YMR309C YDR278CQ05612 105 aa-0.5□□□□□ -2.49
NIP1YMR309C SSN2P38931 1420 aa-0.5□□□□□ -2.49
NIP1YMR309C MRPL38P35996 138 aaPredicted RBP-0.5□□□□□ -2.49
NIP1YMR309C RPS20P38701 121 aaKnown RBP-0.5□□□□□ -2.49
NIP1YMR309C YOR097CQ12274 175 aaPredicted RBP-0.5□□□□□ -2.49
NIP1YMR309C FMP27Q06179 2628 aa-0.51□□□□□ -2.49
NIP1YMR309C HKR1P41809 1802 aa-0.51□□□□□ -2.49
NIP1YMR309C YRF1-1P0CX20 1796 aa-0.51□□□□□ -2.49
NIP1YMR309C YRF1-5P0CX21 1796 aa-0.51□□□□□ -2.49
NIP1YMR309C YRF1-8P0CX22 1796 aa-0.51□□□□□ -2.49
NIP1YMR309C HYM1P32464 399 aa-0.51□□□□□ -2.49
NIP1YMR309C YBR292CP38357 123 aa-0.51□□□□□ -2.49
NIP1YMR309C YHR130CP38834 111 aa-0.51□□□□□ -2.49
NIP1YMR309C CYC2P38909 366 aa-0.51□□□□□ -2.49
NIP1YMR309C GIM4P40005 111 aaKnown RBP-0.51□□□□□ -2.49
NIP1YMR309C LSM6Q06406 86 aaKnown RBP-0.51□□□□□ -2.49
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms