RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C RPL13BP40212 199 aaKnown RBP1.3□□□□□ -2.2
VTI1YMR197C VAM10Q08474 114 aa1.3□□□□□ -2.2
VTI1YMR197C YNL146C-AQ3E7Z1 64 aa1.3□□□□□ -2.2
VTI1YMR197C COA6Q3E846 104 aa1.3□□□□□ -2.2
VTI1YMR197C MIC10Q96VH5 97 aa1.3□□□□□ -2.2
VTI1YMR197C TY3B-IQ7LHG5 1498 aaKnown RBP1.3□□□□□ -2.2
VTI1YMR197C YLR422WQ06409 1932 aa1.29□□□□□ -2.2
VTI1YMR197C PFY1P07274 126 aa1.29□□□□□ -2.2
VTI1YMR197C PAU12P53343 120 aa1.29□□□□□ -2.2
VTI1YMR197C RPL22BP56628 122 aaKnown RBP1.29□□□□□ -2.2
VTI1YMR197C SED1Q01589 338 aa1.29□□□□□ -2.2
VTI1YMR197C YIL014C-AQ02598 104 aa1.29□□□□□ -2.2
VTI1YMR197C YLR194CQ05777 254 aa1.29□□□□□ -2.2
VTI1YMR197C HPA2Q06592 156 aa1.29□□□□□ -2.2
VTI1YMR197C YCR075W-AQ3E830 75 aa1.29□□□□□ -2.2
VTI1YMR197C KSH1Q8TGJ3 72 aa1.29□□□□□ -2.2
VTI1YMR197C RPL33AP05744 107 aaKnown RBP1.28□□□□□ -2.2
VTI1YMR197C YGL014C-AP0C5N1 53 aa1.28□□□□□ -2.2
VTI1YMR197C YCL042WP25572 119 aa1.28□□□□□ -2.2
VTI1YMR197C YBR027CP38220 110 aa1.28□□□□□ -2.2
VTI1YMR197C LST8P41318 303 aa1.28□□□□□ -2.2
VTI1YMR197C SNN1P48232 102 aa1.28□□□□□ -2.2
VTI1YMR197C MIX14Q04341 121 aa1.28□□□□□ -2.2
VTI1YMR197C COA3Q3E7B2 85 aa1.28□□□□□ -2.2
VTI1YMR197C PCC1Q3E833 88 aa1.28□□□□□ -2.2
VTI1YMR197C PAU2P32612 120 aa1.27□□□□□ -2.21
VTI1YMR197C ATG8P38182 117 aaRIP-Chip data1.27□□□□□ -2.21not detected
VTI1YMR197C YBR242WP38331 238 aa1.27□□□□□ -2.21
VTI1YMR197C YIR020CP40575 100 aa1.27□□□□□ -2.21
VTI1YMR197C YMR122CQ03879 124 aa1.27□□□□□ -2.21
VTI1YMR197C UBR1P19812 1950 aa1.27□□□□□ -2.21
VTI1YMR197C PAU19P0CE85 124 aa1.26□□□□□ -2.21
VTI1YMR197C PAU3P25610 124 aa1.26□□□□□ -2.21
VTI1YMR197C SRX1P36077 127 aa1.26□□□□□ -2.21
VTI1YMR197C COX23P38824 151 aa1.26□□□□□ -2.21
VTI1YMR197C YFL065CP43539 102 aa1.26□□□□□ -2.21
VTI1YMR197C FIT3Q08907 204 aa1.26□□□□□ -2.21
VTI1YMR197C TY1B-HO13535 1793 aa1.26□□□□□ -2.21
VTI1YMR197C PAU24P38155 120 aa1.25□□□□□ -2.21
VTI1YMR197C SNU13P39990 126 aaKnown RBP1.25□□□□□ -2.21
VTI1YMR197C POR2P40478 281 aa1.25□□□□□ -2.21
VTI1YMR197C EMC5P40540 141 aa1.25□□□□□ -2.21
VTI1YMR197C NHP10Q03435 203 aa1.25□□□□□ -2.21
VTI1YMR197C SEN15Q04675 128 aa1.25□□□□□ -2.21
VTI1YMR197C YDR029WQ12111 104 aa1.25□□□□□ -2.21
VTI1YMR197C YGL194C-AQ2V2P6 80 aa1.25□□□□□ -2.21
VTI1YMR197C RSF2P46974 1380 aa1.24□□□□□ -2.21
VTI1YMR197C PAU16P35994 123 aa1.24□□□□□ -2.21
VTI1YMR197C MSL1P40567 111 aaPredicted RBP1.24□□□□□ -2.21
VTI1YMR197C PAU15P40585 124 aa1.24□□□□□ -2.21
VTI1YMR197C RSM19P53733 91 aaPredicted RBP1.24□□□□□ -2.21
VTI1YMR197C IRC21Q04772 201 aa1.24□□□□□ -2.21
VTI1YMR197C COA4Q05809 96 aa1.24□□□□□ -2.21
VTI1YMR197C PRM3Q08931 133 aa1.24□□□□□ -2.21
VTI1YMR197C YLR363W-AQ3E747 85 aa1.24□□□□□ -2.21
VTI1YMR197C LTE1P07866 1435 aa1.23□□□□□ -2.21
VTI1YMR197C YLR419WQ06698 1435 aaKnown RBP1.23□□□□□ -2.21
VTI1YMR197C ROM2P51862 1356 aaKnown RBP1.23□□□□□ -2.21
VTI1YMR197C RPL22AP05749 121 aaKnown RBP1.23□□□□□ -2.21
VTI1YMR197C AIM4P38305 123 aaPredicted RBP1.23□□□□□ -2.21
VTI1YMR197C YHL005CP38752 130 aa1.23□□□□□ -2.21
VTI1YMR197C YHR138CP38841 114 aaPredicted RBP1.23□□□□□ -2.21
VTI1YMR197C YMR321CQ04898 105 aa1.23□□□□□ -2.21
VTI1YMR197C SCP1Q08873 200 aa1.23□□□□□ -2.21
VTI1YMR197C YPR203WQ08994 102 aa1.23□□□□□ -2.21
VTI1YMR197C PDR10P51533 1564 aa1.22□□□□□ -2.21
VTI1YMR197C YSF3P0C074 85 aaPredicted RBP1.22□□□□□ -2.21
VTI1YMR197C SRB6P32570 121 aa1.22□□□□□ -2.21
VTI1YMR197C CYB5P40312 120 aa1.22□□□□□ -2.21
VTI1YMR197C YIL163CP40448 117 aa1.22□□□□□ -2.21
VTI1YMR197C YCL048W-AQ2V2Q2 79 aa1.22□□□□□ -2.21
VTI1YMR197C YKL068W-AQ3E826 78 aa1.22□□□□□ -2.21
VTI1YMR197C FAS1P07149 2051 aaKnown RBP1.21□□□□□ -2.22
VTI1YMR197C ECM12O13529 151 aa1.21□□□□□ -2.22
VTI1YMR197C HMRA1P0CY11 126 aa1.21□□□□□ -2.22
VTI1YMR197C HMRA2P0CY13 119 aa1.21□□□□□ -2.22
VTI1YMR197C YJL009WP47078 108 aa1.21□□□□□ -2.22
VTI1YMR197C YMR082CQ04276 118 aa1.21□□□□□ -2.22
VTI1YMR197C YLR285C-AQ3E771 56 aa1.21□□□□□ -2.22
VTI1YMR197C SUS1Q6WNK7 96 aa1.21□□□□□ -2.22
VTI1YMR197C DNA2P38859 1522 aa1.2□□□□□ -2.22
VTI1YMR197C YHR212W-AP0CX91 67 aa1.2□□□□□ -2.22
VTI1YMR197C YHL037CP38733 133 aa1.2□□□□□ -2.22
VTI1YMR197C ICS3P47034 131 aa1.2□□□□□ -2.22
VTI1YMR197C YNL122CP53921 115 aaPredicted RBP1.2□□□□□ -2.22
VTI1YMR197C LSM6Q06406 86 aaKnown RBP1.2□□□□□ -2.22
VTI1YMR197C RRT15Q3E811 62 aa1.2□□□□□ -2.22
VTI1YMR197C GCV3P39726 170 aaPredicted RBP1.19□□□□□ -2.22
VTI1YMR197C RSM18P40033 138 aa1.19□□□□□ -2.22
VTI1YMR197C YDR042CQ03205 200 aa1.19□□□□□ -2.22
VTI1YMR197C YSP2Q06681 1438 aa1.19□□□□□ -2.22
VTI1YMR197C YGL041C-BQ3E750 60 aa1.19□□□□□ -2.22
VTI1YMR197C ENV10Q99382 181 aa1.19□□□□□ -2.22
VTI1YMR197C YPK9Q12697 1472 aa1.18□□□□□ -2.22
VTI1YMR197C ROX3P25046 220 aa1.18□□□□□ -2.22
VTI1YMR197C PAU5P43575 122 aa1.18□□□□□ -2.22
VTI1YMR197C VPS55P47111 140 aa1.18□□□□□ -2.22
VTI1YMR197C YOL118CQ08259 102 aa1.18□□□□□ -2.22
VTI1YMR197C CCW12Q12127 133 aa1.18□□□□□ -2.22
VTI1YMR197C AQY2P0CD90 149 aa1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms