RNA–Protein interactions for RNA: YLR447C

VMA6, Transcript of Subunit d of the V0 integral membrane domain of V-ATPase, yeastyeast

Gene VMA6, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA6YLR447C MIC10Q96VH5 97 aa1.75□□□□□ -2.13
VMA6YLR447C PDR10P51533 1564 aa1.75□□□□□ -2.13
VMA6YLR447C RPL36BO14455 100 aaKnown RBP1.74□□□□□ -2.13
VMA6YLR447C RPL36AP05745 100 aaPredicted RBP1.74□□□□□ -2.13
VMA6YLR447C YGL010WP25338 174 aa1.74□□□□□ -2.13
VMA6YLR447C PAU12P53343 120 aa1.74□□□□□ -2.13
VMA6YLR447C VAM10Q08474 114 aa1.74□□□□□ -2.13
VMA6YLR447C COA6Q3E846 104 aa1.74□□□□□ -2.13
VMA6YLR447C KSH1Q8TGJ3 72 aa1.74□□□□□ -2.13
VMA6YLR447C RIF1P29539 1916 aa1.74□□□□□ -2.13
VMA6YLR447C YRF1-3P0CX14 1859 aa1.73□□□□□ -2.13
VMA6YLR447C YRF1-7P0CX15 1859 aa1.73□□□□□ -2.13
VMA6YLR447C YRF1-6P53819 1859 aa1.73□□□□□ -2.13
VMA6YLR447C YHR213WP0CI67 198 aa1.73□□□□□ -2.13
VMA6YLR447C YEL008WP40001 126 aa1.73□□□□□ -2.13
VMA6YLR447C SED1Q01589 338 aa1.73□□□□□ -2.13
VMA6YLR447C MIX14Q04341 121 aa1.73□□□□□ -2.13
VMA6YLR447C YLR194CQ05777 254 aa1.73□□□□□ -2.13
VMA6YLR447C YNL146C-AQ3E7Z1 64 aa1.73□□□□□ -2.13
VMA6YLR447C ESC1Q03661 1658 aaKnown RBP1.72□□□□□ -2.13
VMA6YLR447C QCR8P08525 94 aa1.72□□□□□ -2.13
VMA6YLR447C SNN1P48232 102 aa1.72□□□□□ -2.13
VMA6YLR447C RPL22BP56628 122 aaKnown RBP1.72□□□□□ -2.13
VMA6YLR447C YIL014C-AQ02598 104 aa1.72□□□□□ -2.13
VMA6YLR447C PCC1Q3E833 88 aa1.72□□□□□ -2.13
VMA6YLR447C LTE1P07866 1435 aa1.72□□□□□ -2.13
VMA6YLR447C RSF2P46974 1380 aa1.72□□□□□ -2.13
VMA6YLR447C RPL33AP05744 107 aaKnown RBP1.71□□□□□ -2.14
VMA6YLR447C YGL014C-AP0C5N1 53 aa1.71□□□□□ -2.14
VMA6YLR447C YCL042WP25572 119 aa1.71□□□□□ -2.14
VMA6YLR447C PAU2P32612 120 aa1.71□□□□□ -2.14
VMA6YLR447C SRX1P36077 127 aa1.71□□□□□ -2.14
VMA6YLR447C ATG8P38182 117 aaRIP-Chip data1.71□□□□□ -2.14not detected
VMA6YLR447C YBR242WP38331 238 aa1.71□□□□□ -2.14
VMA6YLR447C SNU13P39990 126 aaKnown RBP1.71□□□□□ -2.14
VMA6YLR447C RPL13BP40212 199 aaKnown RBP1.71□□□□□ -2.14
VMA6YLR447C YIR020CP40575 100 aa1.71□□□□□ -2.14
VMA6YLR447C HPA2Q06592 156 aa1.71□□□□□ -2.14
VMA6YLR447C YGL194C-AQ2V2P6 80 aa1.71□□□□□ -2.14
VMA6YLR447C COA3Q3E7B2 85 aa1.71□□□□□ -2.14
VMA6YLR447C PFY1P07274 126 aa1.7□□□□□ -2.14
VMA6YLR447C YBR027CP38220 110 aa1.7□□□□□ -2.14
VMA6YLR447C LST8P41318 303 aa1.7□□□□□ -2.14
VMA6YLR447C YLR419WQ06698 1435 aaKnown RBP1.7□□□□□ -2.14
VMA6YLR447C YDR029WQ12111 104 aa1.7□□□□□ -2.14
VMA6YLR447C PAU19P0CE85 124 aa1.69□□□□□ -2.14
VMA6YLR447C PAU3P25610 124 aa1.69□□□□□ -2.14
VMA6YLR447C PAU24P38155 120 aa1.69□□□□□ -2.14
VMA6YLR447C COX23P38824 151 aa1.69□□□□□ -2.14
VMA6YLR447C EMC5P40540 141 aa1.69□□□□□ -2.14
VMA6YLR447C MSL1P40567 111 aaPredicted RBP1.69□□□□□ -2.14
VMA6YLR447C NHP10Q03435 203 aa1.69□□□□□ -2.14
VMA6YLR447C SCP1Q08873 200 aa1.69□□□□□ -2.14
VMA6YLR447C FIT3Q08907 204 aa1.69□□□□□ -2.14
VMA6YLR447C DNA2P38859 1522 aa1.68□□□□□ -2.14
VMA6YLR447C RSM19P53733 91 aaPredicted RBP1.68□□□□□ -2.14
VMA6YLR447C YMR122CQ03879 124 aa1.68□□□□□ -2.14
VMA6YLR447C YKL068W-AQ3E826 78 aa1.68□□□□□ -2.14
VMA6YLR447C ROM2P51862 1356 aaKnown RBP1.68□□□□□ -2.14
VMA6YLR447C RPA190P10964 1664 aaKnown RBP1.67□□□□□ -2.14
VMA6YLR447C POR2P40478 281 aa1.67□□□□□ -2.14
VMA6YLR447C SEN15Q04675 128 aa1.67□□□□□ -2.14
VMA6YLR447C PRM3Q08931 133 aa1.67□□□□□ -2.14
VMA6YLR447C PAU16P35994 123 aa1.66□□□□□ -2.14
VMA6YLR447C YHR138CP38841 114 aaPredicted RBP1.66□□□□□ -2.14
VMA6YLR447C PAU15P40585 124 aa1.66□□□□□ -2.14
VMA6YLR447C YMR082CQ04276 118 aa1.66□□□□□ -2.14
VMA6YLR447C BNI1P41832 1953 aa1.66□□□□□ -2.14
VMA6YLR447C YSP2Q06681 1438 aa1.66□□□□□ -2.14
VMA6YLR447C GSC2P40989 1895 aa1.65□□□□□ -2.14
VMA6YLR447C BPT1P14772 1559 aa1.65□□□□□ -2.15
VMA6YLR447C HMRA1P0CY11 126 aa1.65□□□□□ -2.15
VMA6YLR447C AIM4P38305 123 aaPredicted RBP1.65□□□□□ -2.15
VMA6YLR447C YFL065CP43539 102 aa1.65□□□□□ -2.15
VMA6YLR447C COA4Q05809 96 aa1.65□□□□□ -2.15
VMA6YLR447C YLR363W-AQ3E747 85 aa1.65□□□□□ -2.15
VMA6YLR447C SWR1Q05471 1514 aa1.65□□□□□ -2.15
VMA6YLR447C ECM12O13529 151 aa1.64□□□□□ -2.15
VMA6YLR447C RPL22AP05749 121 aaKnown RBP1.64□□□□□ -2.15
VMA6YLR447C YHL005CP38752 130 aa1.64□□□□□ -2.15
VMA6YLR447C IRC21Q04772 201 aa1.64□□□□□ -2.15
VMA6YLR447C YMR321CQ04898 105 aa1.64□□□□□ -2.15
VMA6YLR447C RRT15Q3E811 62 aa1.64□□□□□ -2.15
VMA6YLR447C YPK9Q12697 1472 aa1.63□□□□□ -2.15
VMA6YLR447C CDC39P25655 2108 aaKnown RBP1.63□□□□□ -2.15
VMA6YLR447C HMRA2P0CY13 119 aa1.63□□□□□ -2.15
VMA6YLR447C SRB6P32570 121 aa1.63□□□□□ -2.15
VMA6YLR447C CYB5P40312 120 aa1.63□□□□□ -2.15
VMA6YLR447C YIL163CP40448 117 aa1.63□□□□□ -2.15
VMA6YLR447C YCL048W-AQ2V2Q2 79 aa1.63□□□□□ -2.15
VMA6YLR447C SUS1Q6WNK7 96 aa1.63□□□□□ -2.15
VMA6YLR447C YSF3P0C074 85 aaPredicted RBP1.62□□□□□ -2.15
VMA6YLR447C YDR042CQ03205 200 aa1.62□□□□□ -2.15
VMA6YLR447C YPR203WQ08994 102 aa1.62□□□□□ -2.15
VMA6YLR447C YLR285C-AQ3E771 56 aa1.62□□□□□ -2.15
VMA6YLR447C YHR212W-AP0CX91 67 aa1.61□□□□□ -2.15
VMA6YLR447C YJL009WP47078 108 aa1.61□□□□□ -2.15
VMA6YLR447C ROX3P25046 220 aa1.6□□□□□ -2.15
VMA6YLR447C YHL037CP38733 133 aa1.6□□□□□ -2.15
VMA6YLR447C GCV3P39726 170 aaPredicted RBP1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms