RNA–Protein interactions for RNA: YLR228C

ECM22, Transcript of Sterol regulatory element binding protein, yeastyeast

Gene ECM22, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM22YLR228C YEL067CP39978 195 aa3.28□□□□□ -1.88
ECM22YLR228C VHS2P40463 436 aa3.28□□□□□ -1.88
ECM22YLR228C TIM10P87108 93 aa3.28□□□□□ -1.88
ECM22YLR228C COX12Q01519 83 aa3.28□□□□□ -1.88
ECM22YLR228C NCE101Q02820 53 aa3.28□□□□□ -1.88
ECM22YLR228C YHP1Q04116 353 aa3.28□□□□□ -1.88
ECM22YLR228C RXT3Q07458 294 aa3.28□□□□□ -1.88
ECM22YLR228C KTI11Q3E840 82 aa3.28□□□□□ -1.88
ECM22YLR228C BEM2P39960 2167 aaKnown RBP3.28□□□□□ -1.88
ECM22YLR228C MRP10O75012 95 aa3.28□□□□□ -1.89
ECM22YLR228C ROX3P25046 220 aa3.28□□□□□ -1.89
ECM22YLR228C INO2P26798 304 aa3.28□□□□□ -1.89
ECM22YLR228C TIM23P32897 222 aa3.28□□□□□ -1.89
ECM22YLR228C YPL261CQ08976 102 aa3.28□□□□□ -1.89
ECM22YLR228C TRP1P00912 224 aa3.27□□□□□ -1.89
ECM22YLR228C TOM6P33448 61 aa3.27□□□□□ -1.89
ECM22YLR228C SMP1P38128 452 aa3.27□□□□□ -1.89
ECM22YLR228C MST27P53176 234 aa3.27□□□□□ -1.89
ECM22YLR228C RPC11Q04307 110 aaPredicted RBP3.27□□□□□ -1.89
ECM22YLR228C Q0255P03881 472 aa3.27□□□□□ -1.89
ECM22YLR228C YNR077CP53758 84 aa3.27□□□□□ -1.89
ECM22YLR228C YPL038W-AQ3E7B4 63 aa3.27□□□□□ -1.89
ECM22YLR228C YDL022C-AP0C5L6 82 aa3.26□□□□□ -1.89
ECM22YLR228C YKR032WP36127 104 aa3.26□□□□□ -1.89
ECM22YLR228C YFL051CP43552 160 aa3.26□□□□□ -1.89
ECM22YLR228C UBC13P52490 153 aa3.26□□□□□ -1.89
ECM22YLR228C VEL1P53058 206 aa3.26□□□□□ -1.89
ECM22YLR228C IRC19Q07843 230 aa3.26□□□□□ -1.89
ECM22YLR228C FIT2Q08906 153 aa3.26□□□□□ -1.89
ECM22YLR228C PBI2P0CT04 75 aaKnown RBP3.25□□□□□ -1.89
ECM22YLR228C TOM40P23644 387 aaKnown RBP3.25□□□□□ -1.89
ECM22YLR228C FPR2P32472 135 aa3.25□□□□□ -1.89
ECM22YLR228C YRA2P36036 203 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
ECM22YLR228C RPL32P38061 130 aaKnown RBP3.25□□□□□ -1.89
ECM22YLR228C TVP23P38962 199 aa3.25□□□□□ -1.89
ECM22YLR228C NCA3P46955 337 aa3.25□□□□□ -1.89
ECM22YLR228C SWS2P53937 143 aa3.25□□□□□ -1.89
ECM22YLR228C VPS63O13549 108 aa3.25□□□□□ -1.89
ECM22YLR228C YHL018WP38744 120 aaPredicted RBP3.25□□□□□ -1.89
ECM22YLR228C YNL217WP40152 326 aa3.25□□□□□ -1.89
ECM22YLR228C YIA6P40556 373 aa3.25□□□□□ -1.89
ECM22YLR228C FHN1P53279 174 aa3.25□□□□□ -1.89
ECM22YLR228C MIX14Q04341 121 aa3.25□□□□□ -1.89
ECM22YLR228C YKL183C-AQ3E765 70 aa3.25□□□□□ -1.89
ECM22YLR228C BLM10P43583 2143 aa3.25□□□□□ -1.89
ECM22YLR228C RRT13P40042 185 aa3.24□□□□□ -1.89
ECM22YLR228C YER079WP40052 210 aaKnown RBP3.24□□□□□ -1.89
ECM22YLR228C YNL194CP40169 301 aa3.24□□□□□ -1.89
ECM22YLR228C ATP23P53722 227 aa3.24□□□□□ -1.89
ECM22YLR228C RPL15BP54780 204 aaPredicted RBP3.24□□□□□ -1.89
ECM22YLR228C HNT3Q08702 217 aa3.24□□□□□ -1.89
ECM22YLR228C IGO2Q9P305 131 aa3.24□□□□□ -1.89
ECM22YLR228C RPL42AP0CX27 106 aaKnown RBP3.24□□□□□ -1.89
ECM22YLR228C RPL42BP0CX28 106 aaKnown RBP3.24□□□□□ -1.89
ECM22YLR228C HMRA2P0CY13 119 aa3.24□□□□□ -1.89
ECM22YLR228C VTC1P40046 129 aaRIP-Chip data3.24□□□□□ -1.89not detected
ECM22YLR228C DAD4P69851 72 aa3.24□□□□□ -1.89
ECM22YLR228C VPS68Q12016 184 aa3.24□□□□□ -1.89
ECM22YLR228C YOR029WQ12243 111 aa3.24□□□□□ -1.89
ECM22YLR228C BOL1Q3E793 110 aa3.24□□□□□ -1.89
ECM22YLR228C KSH1Q8TGJ3 72 aa3.24□□□□□ -1.89
ECM22YLR228C YHR214C-EQ8TGK0 99 aa3.24□□□□□ -1.89
ECM22YLR228C CYR1P08678 2026 aaKnown RBP3.23□□□□□ -1.89
ECM22YLR228C MBB1P39534 108 aa3.23□□□□□ -1.89
ECM22YLR228C YDR209CQ03480 137 aa3.23□□□□□ -1.89
ECM22YLR228C YLR112WQ12130 139 aa3.23□□□□□ -1.89
ECM22YLR228C TIM22Q12328 207 aa3.23□□□□□ -1.89
ECM22YLR228C YGL258W-AQ3E740 77 aa3.23□□□□□ -1.89
ECM22YLR228C PCL2P25693 308 aa3.23□□□□□ -1.89
ECM22YLR228C FMP46P36141 133 aaKnown RBP3.23□□□□□ -1.89
ECM22YLR228C YMR141CP40211 102 aa3.23□□□□□ -1.89
ECM22YLR228C SFT1P43682 97 aa3.23□□□□□ -1.89
ECM22YLR228C SDC1Q03323 175 aa3.23□□□□□ -1.89
ECM22YLR228C YMR254CQ04838 102 aa3.23□□□□□ -1.89
ECM22YLR228C YLR412C-AQ3E742 68 aa3.23□□□□□ -1.89
ECM22YLR228C YAL064W-BO13512 126 aa3.22□□□□□ -1.89
ECM22YLR228C AQY1P0CD91 305 aa3.22□□□□□ -1.89
ECM22YLR228C ARF1P11076 181 aaKnown RBP3.22□□□□□ -1.89
ECM22YLR228C GLE2P40066 365 aa3.22□□□□□ -1.89
ECM22YLR228C PBA1Q05778 276 aa3.22□□□□□ -1.89
ECM22YLR228C BET1P22804 142 aa3.22□□□□□ -1.89
ECM22YLR228C SVP26P38869 228 aa3.22□□□□□ -1.89
ECM22YLR228C SGN1P40561 250 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
ECM22YLR228C RRS1Q08746 203 aaKnown RBP3.22□□□□□ -1.89
ECM22YLR228C RPL18AP0CX49 186 aaKnown RBP3.21□□□□□ -1.9
ECM22YLR228C RPL18BP0CX50 186 aaKnown RBP3.21□□□□□ -1.9
ECM22YLR228C YMR31P19955 123 aa3.21□□□□□ -1.9
ECM22YLR228C AIM19P40502 157 aa3.21□□□□□ -1.9
ECM22YLR228C IRC23Q08416 157 aa3.21□□□□□ -1.9
ECM22YLR228C ACC1Q00955 2233 aaKnown RBP3.21□□□□□ -1.9
ECM22YLR228C RPS8AP0CX39 200 aaKnown RBP3.21□□□□□ -1.9
ECM22YLR228C RPS8BP0CX40 200 aaKnown RBP3.21□□□□□ -1.9
ECM22YLR228C IES6P32617 166 aa3.21□□□□□ -1.9
ECM22YLR228C YBR209WP38311 105 aa3.21□□□□□ -1.9
ECM22YLR228C LYS1P38998 373 aaRIP-Chip data3.21□□□□□ -1.9not detected
ECM22YLR228C YAR029WP39549 74 aa3.21□□□□□ -1.9
ECM22YLR228C YER187WP40102 141 aa3.21□□□□□ -1.9
ECM22YLR228C SIM1P40472 476 aa3.21□□□□□ -1.9
ECM22YLR228C ECO1P43605 281 aa3.21□□□□□ -1.9
ECM22YLR228C MOT3P54785 490 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms