RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W YET1P35723 206 aa1.68□□□□□ -2.14
SNU114YKL173W TIR3P40552 269 aa1.68□□□□□ -2.14
SNU114YKL173W YGL193CP53097 103 aa1.68□□□□□ -2.14
SNU114YKL173W GAL83Q04739 417 aa1.68□□□□□ -2.14
SNU114YKL173W YDL012CQ12489 107 aa1.68□□□□□ -2.14
SNU114YKL173W ODC2Q99297 307 aa1.68□□□□□ -2.14
SNU114YKL173W BPH1P25356 2167 aa1.68□□□□□ -2.14
SNU114YKL173W RAS2P01120 322 aaKnown RBP1.68□□□□□ -2.14
SNU114YKL173W RAD6P06104 172 aa1.68□□□□□ -2.14
SNU114YKL173W YFR010W-AP0C5N0 62 aa1.68□□□□□ -2.14
SNU114YKL173W YOL162WP0CF19 215 aa1.68□□□□□ -2.14
SNU114YKL173W VMA11P32842 164 aa1.68□□□□□ -2.14
SNU114YKL173W TDA2P40045 126 aa1.68□□□□□ -2.14
SNU114YKL173W GPI19Q04082 140 aa1.68□□□□□ -2.14
SNU114YKL173W RAF1Q06891 181 aa1.68□□□□□ -2.14
SNU114YKL173W CSI2Q08054 341 aa1.68□□□□□ -2.14
SNU114YKL173W YOR381W-AQ3E804 55 aa1.68□□□□□ -2.14
SNU114YKL173W KSH1Q8TGJ3 72 aa1.68□□□□□ -2.14
SNU114YKL173W MIC10Q96VH5 97 aa1.68□□□□□ -2.14
SNU114YKL173W CSF1Q12150 2958 aa1.68□□□□□ -2.14
SNU114YKL173W HAP3P13434 144 aa1.67□□□□□ -2.14
SNU114YKL173W FUN14P18411 198 aa1.67□□□□□ -2.14
SNU114YKL173W PHO88P38264 188 aaPredicted RBP1.67□□□□□ -2.14
SNU114YKL173W YHR125WP38831 101 aa1.67□□□□□ -2.14
SNU114YKL173W YMR090WQ04304 227 aaKnown RBP1.67□□□□□ -2.14
SNU114YKL173W FEX2Q08991 375 aa1.67□□□□□ -2.14
SNU114YKL173W CDC39P25655 2108 aaKnown RBP1.67□□□□□ -2.14
SNU114YKL173W UBR1P19812 1950 aa1.67□□□□□ -2.14
SNU114YKL173W CPA1P07258 411 aaKnown RBP1.67□□□□□ -2.14
SNU114YKL173W YHR032W-AP0C5N6 59 aa1.67□□□□□ -2.14
SNU114YKL173W AGA2P32781 87 aa1.67□□□□□ -2.14
SNU114YKL173W MID2P36027 376 aa1.67□□□□□ -2.14
SNU114YKL173W EMC5P40540 141 aa1.67□□□□□ -2.14
SNU114YKL173W DAN1P47178 298 aa1.67□□□□□ -2.14
SNU114YKL173W MPC3P53311 146 aa1.67□□□□□ -2.14
SNU114YKL173W BEM2P39960 2167 aaKnown RBP1.67□□□□□ -2.14
SNU114YKL173W ECM12O13529 151 aa1.66□□□□□ -2.14
SNU114YKL173W YKL044WP36092 106 aa1.66□□□□□ -2.14
SNU114YKL173W TVP23P38962 199 aa1.66□□□□□ -2.14
SNU114YKL173W MSL1P40567 111 aaPredicted RBP1.66□□□□□ -2.14
SNU114YKL173W YFL065CP43539 102 aa1.66□□□□□ -2.14
SNU114YKL173W ECO1P43605 281 aa1.66□□□□□ -2.14
SNU114YKL173W YPR203WQ08994 102 aa1.66□□□□□ -2.14
SNU114YKL173W YCR099CP25657 155 aa1.66□□□□□ -2.14
SNU114YKL173W YBR013CP38215 129 aa1.66□□□□□ -2.14
SNU114YKL173W DSK2P48510 373 aa1.66□□□□□ -2.14
SNU114YKL173W KNH1P50112 268 aa1.66□□□□□ -2.14
SNU114YKL173W RRT15Q3E811 62 aa1.66□□□□□ -2.14
SNU114YKL173W SSS1P35179 80 aa1.66□□□□□ -2.14
SNU114YKL173W RRT1P38192 103 aa1.66□□□□□ -2.14
SNU114YKL173W YEL073CP39974 107 aa1.66□□□□□ -2.14
SNU114YKL173W YFL012WP43580 148 aa1.66□□□□□ -2.14
SNU114YKL173W YNR064CP53750 290 aa1.66□□□□□ -2.14
SNU114YKL173W FIT1Q04433 528 aa1.66□□□□□ -2.14
SNU114YKL173W YHR213W-AQ8TGT4 77 aa1.66□□□□□ -2.14
SNU114YKL173W MEC1P38111 2368 aa1.66□□□□□ -2.14
SNU114YKL173W TIM9O74700 87 aa1.65□□□□□ -2.14
SNU114YKL173W UMP1P38293 148 aa1.65□□□□□ -2.14
SNU114YKL173W ARC15P40518 154 aaRIP-Chip data1.65□□□□□ -2.14not detected
SNU114YKL173W YOR385WQ08909 290 aa1.65□□□□□ -2.14
SNU114YKL173W YLR365WQ7LIF2 110 aa1.65□□□□□ -2.14
SNU114YKL173W POR1P04840 283 aaKnown RBP1.65□□□□□ -2.15
SNU114YKL173W CYB5P40312 120 aa1.65□□□□□ -2.15
SNU114YKL173W YFR035CP43608 114 aa1.65□□□□□ -2.15
SNU114YKL173W MLP1Q02455 1875 aaKnown RBP1.65□□□□□ -2.15
SNU114YKL173W COA6Q3E846 104 aa1.65□□□□□ -2.15
SNU114YKL173W YNL217WP40152 326 aa1.64□□□□□ -2.15
SNU114YKL173W FLX1P40464 311 aa1.64□□□□□ -2.15
SNU114YKL173W YGR164WP53291 111 aa1.64□□□□□ -2.15
SNU114YKL173W YDR274CP87283 123 aa1.64□□□□□ -2.15
SNU114YKL173W YMR295CQ03559 197 aa1.64□□□□□ -2.15
SNU114YKL173W YMR082CQ04276 118 aa1.64□□□□□ -2.15
SNU114YKL173W YOR015WQ12169 119 aa1.64□□□□□ -2.15
SNU114YKL173W FLO1P32768 1537 aa1.64□□□□□ -2.15
SNU114YKL173W UBC4P15731 148 aa1.64□□□□□ -2.15
SNU114YKL173W MIG1P27705 504 aa1.64□□□□□ -2.15
SNU114YKL173W YAR068WP39564 161 aa1.64□□□□□ -2.15
SNU114YKL173W SNN1P48232 102 aa1.64□□□□□ -2.15
SNU114YKL173W RSM19P53733 91 aaPredicted RBP1.64□□□□□ -2.15
SNU114YKL173W ADH3P07246 375 aaKnown RBP1.64□□□□□ -2.15
SNU114YKL173W SPG1P50088 95 aa1.64□□□□□ -2.15
SNU114YKL173W PAU12P53343 120 aa1.64□□□□□ -2.15
SNU114YKL173W MRPS8Q03799 155 aa1.64□□□□□ -2.15
SNU114YKL173W ATG40Q99325 256 aa1.64□□□□□ -2.15
SNU114YKL173W PAI3P01094 68 aa1.63□□□□□ -2.15
SNU114YKL173W YJR146WP47174 117 aa1.63□□□□□ -2.15
SNU114YKL173W THG1P53215 237 aaKnown RBP1.63□□□□□ -2.15
SNU114YKL173W RIM9Q04734 239 aa1.63□□□□□ -2.15
SNU114YKL173W PAU2P32612 120 aa1.63□□□□□ -2.15
SNU114YKL173W MRPS9P38120 278 aa1.63□□□□□ -2.15
SNU114YKL173W LIP1Q03579 150 aa1.63□□□□□ -2.15
SNU114YKL173W DAD1Q12248 94 aa1.63□□□□□ -2.15
SNU114YKL173W MHF1Q3E835 90 aa1.63□□□□□ -2.15
SNU114YKL173W QCR10P37299 77 aa1.62□□□□□ -2.15
SNU114YKL173W YLR296WQ05898 108 aa1.62□□□□□ -2.15
SNU114YKL173W YDL241WQ07738 123 aa1.62□□□□□ -2.15
SNU114YKL173W GRX5Q02784 150 aa1.62□□□□□ -2.15
SNU114YKL173W NMA1Q06178 401 aaKnown RBP1.62□□□□□ -2.15
SNU114YKL173W KRE1P17260 313 aa1.61□□□□□ -2.15
SNU114YKL173W FYV5P25585 152 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 109.5 ms